Fitness for 5 genes in Paraburkholderia graminis OAS925

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500 ntABIE53_004467 and ABIE53_004468 are separated by 19 nucleotidesABIE53_004468 and ABIE53_004469 overlap by 1 nucleotidesABIE53_004469 and ABIE53_004470 are separated by 42 nucleotidesABIE53_004470 and ABIE53_004471 are separated by 37 nucleotides ABIE53_004467: ABIE53_004467 - protein phosphatase, at 656,773 to 657,543 _004467 ABIE53_004468: ABIE53_004468 - transcriptional regulator with GAF, ATPase, and Fis domain, at 657,563 to 658,921 _004468 ABIE53_004469: ABIE53_004469 - subfamily B ATP-binding cassette protein HlyB/CyaB, at 658,921 to 661,977 _004469 ABIE53_004470: ABIE53_004470 - parvulin-like peptidyl-prolyl isomerase, at 662,020 to 662,772 _004470 ABIE53_004471: ABIE53_004471 - hemolysin D, at 662,810 to 664,183 _004471
Group Condition ABIE53_004467 ABIE53_004468 ABIE53_004469 ABIE53_004470 ABIE53_004471
carbon source D-Mannose (C) -0.0 -1.2 -0.5 -1.0 -0.4
stress R2A with (5z)-4-bromo-5-(bromomethylene)-2(5h)-furanone 10 uM +0.1 -0.8 -0.1 -1.8 -0.5
plant outgrowth control Plant outgrowth control -0.2 -1.3 -0.1 -0.9 -0.5
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_liquid; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.2 -0.7 -0.3 -1.1 -1.2
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=clay; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -1.1 -1.0 -0.2 -0.1 -0.6
carbon source Shikimic Acid 5 mM (C) -0.1 -0.7 -0.4 -1.0 -0.5
stress R2A with Tricalcium phosphate 0.5 g/L -0.4 -0.7 -0.3 -0.6 -0.4
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_liquid; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.3 -0.4 +0.0 -1.1 -0.7
carbon source Glycerol (C) -0.2 -0.5 -0.3 -1.3 -0.1
in planta Plant=Medicago_truncatula; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sterile_soil; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=19_days -1.2 -0.8 -0.1 -0.2 -0.0
carbon source L-Proline (C) -0.1 -0.6 -0.5 -1.0 -0.2
stress M9 with Chloride 200 mM -0.8 -0.7 -0.6 -0.3 +0.1
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=root; GrowthSubstrate=sterile_soil; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.5 +0.2 -0.3 -0.6 -0.7
motility_chemotaxis Motility_chemotaxis, R2A; outer cut -0.8 -0.3 -0.2 -1.1 +0.4
in planta Plant=no_plant; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.8 +0.2 -0.8 -0.7 +0.2
stress R2A with N-(3-oxohexanoyl)-DL-homoserine lactone 10 uM +0.3 -0.6 -0.6 -0.7 -0.1
carbon source Inosine (C) -0.7 -0.1 -0.2 -1.0 +0.4
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=root; GrowthSubstrate=sterile_soil; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.5 -0.6 -1.2 +0.1 -0.5
carbon source D-Galacturonic Acid (C) +0.6 -0.7 +0.1 -1.0 -0.6
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=clay; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.6 -0.6 -0.7 -0.2 -0.3
in planta Plant=switchgrass; PreTreatment=None; PlantTreatment=low_phosphate; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=R2A_with_kan10; Time=21days -1.4 -0.4 +0.6 +0.2 -0.2
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=liquid_soil_extract; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -1.6 +0.8 -0.3 +0.2 -0.2
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=root; GrowthSubstrate=liquid_soil_extract; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -1.6 +0.7 -0.5 +0.3 -0.0
carbon source D-Fructose (C) +0.8 -0.5 +0.2 -0.7 -0.6
in planta Plant=switchgrass; PreTreatment=None; PlantTreatment=low_phosphate; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=R2A_with_kan10; Time=21days -1.0 +0.1 -0.2 +1.0 -0.6
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_liquid; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.5 -0.5 -0.0 +0.2 -1.1
carbon source Tween 20 (C) +1.0 +0.0 +0.0 -1.0 -0.5
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +1.1 +0.5 -0.4 -0.2 -1.0
in planta Plant=no_plant; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_liquid; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +1.0 +0.1 -0.9 +0.3 -0.3
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=clay; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +1.1 +0.7 -0.4 -0.6 -0.3
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