Fitness for 5 genes in Paraburkholderia graminis OAS925

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500 ntABIE53_004418 and ABIE53_004419 are separated by 14 nucleotidesABIE53_004419 and ABIE53_004420 are separated by 94 nucleotidesABIE53_004420 and ABIE53_004421 are separated by 155 nucleotidesABIE53_004421 and ABIE53_004422 are separated by 43 nucleotides ABIE53_004418: ABIE53_004418 - methyl-accepting chemotaxis protein, at 605,713 to 607,287 _004418 ABIE53_004419: ABIE53_004419 - ribose transport system substrate-binding protein, at 607,302 to 608,264 _004419 ABIE53_004420: ABIE53_004420 - hypothetical protein, at 608,359 to 609,699 _004420 ABIE53_004421: ABIE53_004421 - methylated-DNA-[protein]-cysteine S-methyltransferase, at 609,855 to 610,457 _004421 ABIE53_004422: ABIE53_004422 - hypothetical protein, at 610,501 to 612,084 _004422
Group Condition ABIE53_004418 ABIE53_004419 ABIE53_004420 ABIE53_004421 ABIE53_004422
stress RCH2_defined_glucose_5mM with 2,3-dihydroxybenzoic 5 mM -0.3 +0.2 -0.7 -0.7 -0.2
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=liquid_soil_extract; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.8 -0.2 +0.2 -0.5 -0.3
stress RCH2_defined_glucose_5mM with caffeic 1 mM +0.0 +0.3 -1.5 -0.1 -0.4
stress RCH2_defined_glucose_5mM with caffeic 1 mM +0.7 -0.1 -1.8 -0.1 -0.0
stress RCH2_defined_glucose_5mM with Salicylic 5 mM -0.3 +0.6 -0.3 -0.6 -0.3
stress RCH2_defined_glucose_5mM with Chlorogenic 1 mM -0.5 +0.6 -0.3 -0.6 -0.2
stress RCH2_defined_glucose_5mM with caffeic 0.5 mM +0.3 +0.3 -0.8 -0.6 -0.2
stress RCH2_defined_glucose_5mM with 4-Hydroxybenzoic Acid 5 mM -0.3 +0.6 -0.3 -0.6 -0.3
stress RCH2_defined_glucose_5mM with homovanillyl alcohol 5 mM +0.2 +0.5 -0.4 -0.5 -0.5
stress RCH2_defined_glucose_5mM with Nerolidol 5 mM +0.2 +0.5 -0.6 -0.4 -0.2
stress RCH2_defined_glucose_5mM with Chlorogenic 2 mM -0.2 +0.7 -0.4 -0.4 -0.3
stress RCH2_defined_glucose_5mM with Lumazine 5 mM -0.4 +1.2 +0.0 -0.8 -0.5
stress RCH2_defined_glucose_5mM with Lumazine 5 mM -0.2 +1.2 -0.1 -0.9 -0.4
stress RCH2_defined_glucose_5mM with caffeic 0.5 mM +0.3 +0.6 -0.7 -0.3 -0.2
stress RCH2_defined_glucose_5mM with Adenine 5 mM +0.3 +0.7 -0.2 -0.6 -0.3
in planta Plant=no_plant; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_liquid; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.4 +0.4 +0.2 +0.4 -0.5
stress RCH2_defined_glucose_5mM with Adenine 4 mM +0.5 +0.9 -0.4 -0.5 -0.1
stress RCH2_defined_glucose_5mM with Chlorogenic 1 mM +0.5 +0.7 -0.4 -0.1 -0.2
stress RCH2_defined_glucose_5mM with Adenine 2 mM +0.5 +1.0 -0.3 -0.6 -0.1
phage Burk1_100 +1.0 +0.4 -0.5 -0.5 +0.1
in planta Plant=Brachypodium_distachyon; PreTreatment=None; PlantTreatment=low_phosphate; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=R2A_with_kan10; Time=21days +0.8 +0.7 -0.5 +0.1 -0.2
stress RCH2_defined_glucose_5mM with Adenine 2 mM +0.9 +1.0 -0.4 -0.0 -0.4
carbon source L-Proline (C) +0.7 +0.3 -0.4 +0.3 +0.2
carbon source D-Mannose (C) +0.9 +0.6 -0.0 +0.2 +0.2
carbon source D-Glucose-6-Phosphate (C) +0.6 +0.7 +0.0 +0.5 +0.1
carbon source D-Fructose (C) +0.8 +0.4 +0.1 +0.3 +0.4
carbon source L-Rhamnose (C) +0.6 +0.7 +0.1 +0.5 +0.1
carbon source Tween 20 (C) +1.1 +0.6 +0.1 +0.3 +0.0
in planta Plant=Brachypodium_distachyon; PreTreatment=None; PlantTreatment=low_phosphate; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=R2A_with_kan10; Time=21days +0.3 +0.4 +0.3 +1.4 +0.0
carbon source D-Galacturonic Acid (C) +1.1 +0.5 +0.2 +0.3 +0.3
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ABIE53_004418
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ABIE53_004419
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ABIE53_004421
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ABIE53_004422
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