Fitness for 5 genes in Paraburkholderia graminis OAS925

Top 30 experiments (either direction), sorted by average fitness

Or view all 488 experiments or choose conditions or try the comparative fitness browser

Group	Condition	ABIE53_004278	ABIE53_004279	ABIE53_004280	ABIE53_004281	ABIE53_004282
carbon source	4-Hydroxybenzoic Acid (C)	+0.9	-4.4	-4.5	+0.5	+0.1
soil extract	4-Hydroxybenzoic Acid 5 mM in soil extract	-0.6	-2.9	-3.6	+0.1	+0.1
stress	RCH2_defined_glucose_5mM with 4-Hydroxybenzoic Acid 5 mM	-0.9	-2.3	-2.5	+0.1	-0.1
carbon source	4-Hydroxybenzoic Acid (C)	+1.1	-3.2	-3.3	+0.4	-0.2
stress	RCH2_defined_glucose_5mM with 4-Hydroxybenzoic Acid 5 mM	-0.3	-1.8	-2.6	+0.3	-0.2
soil extract	4-Hydroxybenzoic Acid 5 mM in soil extract	+0.1	-1.9	-2.6	-0.0	+0.0
stress	RCH2_defined_glucose_5mM with caffeic 1 mM	-1.1	-1.0	-0.4	-1.2	-0.2
soil extract	Shikimic Acid 5 mM in soil extract	-0.7	-0.7	-1.4	-0.5	-0.6
soil extract	Shikimic Acid 5 mM in soil extract	-0.5	-0.8	-1.0	-0.9	-0.5
stress	RCH2_defined_glucose_5mM with Adenine 4 mM	-2.2	-0.4	-1.3	+0.5	-0.2
stress	RCH2_defined_glucose_5mM with Sucrose 5 mM	-2.2	-0.3	-0.2	+0.2	-0.5
stress	M9 with Propan-1-ol 13 g/L	-2.4	-0.3	-0.2	+0.3	-0.1
stress	RCH2_defined_glucose_5mM with Adenine 4 mM	-0.9	-0.5	-0.9	-0.1	-0.3
soil extract	Adenine 5 mM in soil extract	-1.5	-0.1	-1.2	+0.4	-0.2
carbon source	Acetylated xylan 10 g/L (C)	-1.8	-0.3	+0.1	-0.2	+0.5
in planta	Plant=no_plant; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_liquid; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days	-1.3	+0.6	-0.1	-0.6	+0.1
in planta	Plant=switchgrass; PreTreatment=None; PlantTreatment=low_phosphate; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=R2A_with_kan10; Time=21days	-0.0	-1.5	+0.4	+0.4	-0.5
in planta	Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=clay; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days	+0.9	-0.5	-0.1	-0.5	-1.0
in planta	Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=19_days	-1.4	+1.0	+0.1	-0.4	-0.4
in planta	Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_liquid; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days	+0.6	+0.1	-1.5	-0.5	+0.3
in planta	Plant=Brachypodium_distachyon; PreTreatment=None; PlantTreatment=low_phosphate; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=R2A_with_kan10; Time=21days	+1.0	-1.4	+0.7	-1.0	+0.1
carbon source	D-Gluconic Acid (C)	-1.2	+0.5	-0.0	+0.7	-0.2
in planta	Plant=switchgrass; PreTreatment=None; PlantTreatment=low_phosphate; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=R2A_with_kan10; Time=21days	+1.0	+0.3	-0.3	-0.6	-0.5
in planta	Plant=Brachypodium_distachyon; PreTreatment=None; PlantTreatment=low_phosphate; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=R2A_with_kan10; Time=21days	-0.8	+0.5	+0.5	-0.8	+0.5
in planta	Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_liquid; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days	-1.1	+0.5	+0.4	-0.3	+0.5
in planta	Plant=Medicago_truncatula; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sterile_soil; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=19_days	-1.5	+0.0	+0.2	+0.7	+0.5
in planta	Plant=no_plant; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days	+1.3	-0.6	+0.3	-1.1	+0.5
carbon source	D-Fructose (C)	-0.9	+0.9	-0.2	+1.1	-0.2
in planta	Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=19_days	+1.3	+0.0	+0.8	-0.7	-0.1
in planta	Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=root; GrowthSubstrate=sterile_soil; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=19_days	+1.2	+1.4	-0.1	+0.0	+0.3