Fitness for 5 genes in Paraburkholderia graminis OAS925

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	ABIE53_004277	ABIE53_004278	ABIE53_004279	ABIE53_004280	ABIE53_004281
carbon source	4-Hydroxybenzoic Acid (C)	-4.1	+0.9	-4.4	-4.5	+0.5
soil extract	4-Hydroxybenzoic Acid 5 mM in soil extract	-3.0	-0.6	-2.9	-3.6	+0.1
stress	RCH2_defined_glucose_5mM with 4-Hydroxybenzoic Acid 5 mM	-4.4	-0.9	-2.3	-2.5	+0.1
stress	RCH2_defined_glucose_5mM with 4-Hydroxybenzoic Acid 5 mM	-4.2	-0.3	-1.8	-2.6	+0.3
carbon source	4-Hydroxybenzoic Acid (C)	-3.3	+1.1	-3.2	-3.3	+0.4
soil extract	4-Hydroxybenzoic Acid 5 mM in soil extract	-3.6	+0.1	-1.9	-2.6	-0.0
stress	RCH2_defined_glucose_5mM with caffeic 1 mM	-4.1	-1.1	-1.0	-0.4	-1.2
carbon source	shik 5mM	-5.0	-0.9	-0.3	-0.6	+0.0
carbon source	shik 20mM	-4.8	-0.6	-0.5	-0.6	-0.3
soil extract	Shikimic Acid 5 mM in soil extract	-3.3	-0.7	-0.7	-1.4	-0.5
soil extract	Shikimic Acid 5 mM in soil extract	-3.2	-0.5	-0.8	-1.0	-0.9
carbon source	Shikimic Acid 5 mM (C)	-4.0	-1.4	-0.1	-0.2	-0.2
carbon source	shik 5mM	-4.0	-1.3	-0.2	-0.2	+0.2
carbon source	shik 20mM	-4.0	-0.6	+0.0	-0.5	-0.3
carbon source	Shikimic Acid 5 mM (C)	-4.0	-1.2	-0.2	+0.0	+0.1
soil extract	caffeic 5 mM in soil extract	-3.3	-1.1	-0.4	+0.1	+0.2
stress	RCH2_defined_glucose_5mM with caffeic 0.5 mM	-3.3	-0.4	-0.6	+0.3	+0.0
soil extract	Chlorogenic 5 mM in soil extract	-2.7	-0.9	-0.2	+0.1	+0.0
in planta	Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=root; GrowthSubstrate=sterile_soil; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days	-2.3	-0.7	-0.2	-0.3	-0.2
in planta	Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=root; GrowthSubstrate=sterile_soil; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days	-3.1	+0.2	+0.3	-0.2	-0.6
stress	RCH2_defined_glucose_5mM with Adenine 4 mM	-0.0	-2.2	-0.4	-1.3	+0.5
soil extract	caffeic 5 mM in soil extract	-3.7	+0.2	+0.2	-0.2	+0.2
soil extract	Chlorogenic 5 mM in soil extract	-2.9	-0.5	-0.3	+0.2	+0.4
stress	RCH2_defined_glucose_5mM with caffeic 1 mM	-3.3	+0.5	-0.7	+0.1	+0.3
stress	RCH2_defined_glucose_5mM with caffeic 0.5 mM	-3.1	+0.4	-0.2	+0.0	-0.2
soil extract	Adenine 5 mM in soil extract	-0.5	-1.5	-0.1	-1.2	+0.4
in planta	Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sterile_soil; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days	-3.0	-0.3	+0.9	-0.0	+0.0
in planta	Plant=Medicago_truncatula; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sterile_soil; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=19_days	-1.4	-1.5	+0.0	+0.2	+0.7
in planta	Plant=Brachypodium_distachyon; PreTreatment=None; PlantTreatment=low_phosphate; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=R2A_with_kan10; Time=21days	-0.3	+1.0	-1.4	+0.7	-1.0
in planta	Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=root; GrowthSubstrate=sterile_soil; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=19_days	-2.4	+1.2	+1.4	-0.1	+0.0