Fitness for 5 genes in Paraburkholderia graminis OAS925

Top 30 experiments (either direction), sorted by average fitness

Or view all 488 experiments or choose conditions or try the comparative fitness browser

Group	Condition	ABIE53_004214	ABIE53_004215	ABIE53_004216	ABIE53_004217	ABIE53_004218
in planta	Plant=switchgrass; PreTreatment=None; PlantTreatment=low_phosphate; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=R2A_with_kan10; Time=21days	-0.5	-0.3	+0.3	-0.4	-0.7
in planta	Plant=switchgrass; PreTreatment=None; PlantTreatment=low_phosphate; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=R2A_with_kan10; Time=21days	-0.7	+0.0	+0.3	-0.3	-0.8
in planta	Plant=Brachypodium_distachyon; PreTreatment=None; PlantTreatment=low_phosphate; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=R2A_with_kan10; Time=21days	-0.3	-0.3	+0.1	+0.3	-1.2
in planta	Plant=Arabidopsis_thaliana; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days	-0.5	-0.1	+0.5	-0.2	-1.0
carbon source	L-Fucose (C)	+0.3	+0.1	-0.6	-0.1	-0.9
in planta	Plant=no_plant; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_liquid; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days	+0.5	-0.4	-0.2	-0.1	-1.0
stress	RCH2_defined_glucose_5mM with Lumazine 5 mM	-0.4	+0.2	-0.2	+0.3	-1.1
in planta	Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=root; GrowthSubstrate=sterile_soil; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days	+0.2	-0.5	-0.6	+0.4	-0.4
stress	RCH2_defined_glucose_5mM with Adenine 4 mM	+0.4	+0.4	-0.0	+0.1	-1.5
stress	RCH2_defined_glucose_5mM with Sucrose 5 mM	+0.4	+0.1	-0.2	+0.7	-1.5
in planta	Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=clay; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days	-0.7	-0.2	-0.4	+0.9	-0.1
in planta	Plant=switchgrass; PreTreatment=None; PlantTreatment=low_phosphate; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=R2A_with_kan10; Time=21days	-0.0	+0.3	+0.5	-0.1	-1.1
carbon source	D-Fructose (C)	-0.4	+0.2	-0.3	+0.9	-0.7
in planta	Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=liquid_soil_extract; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days	+0.3	-0.5	-0.0	+0.6	-0.7
carbon source	D-Lactate (C)	+0.1	+0.3	-0.4	+0.6	-0.9
stress	R2A with (5z)-4-bromo-5-(bromomethylene)-2(5h)-furanone 10 uM	+0.7	-0.2	-0.1	+0.7	-1.2
stress	RCH2_defined_glucose_5mM with Adenine 2 mM	+0.6	+0.4	-0.0	+0.2	-1.3
carbon source	Tween 20 (C)	+0.8	+0.1	-0.3	+0.2	-0.9
in planta	Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days	-0.4	-0.2	-0.3	+1.1	-0.2
carbon source	Laminarin 10 g/L (C)	-0.7	+0.2	-0.4	+0.5	+0.5
carbon source	Tween 20 (C)	+0.6	-0.4	-0.2	+0.6	-0.4
carbon source	Shikimic Acid 5 mM (C)	-0.3	-0.1	-0.4	+0.2	+1.0
carbon source	D-Mannose (C)	+0.8	-0.1	-0.5	+0.6	-0.1
carbon source	D-Sorbitol (C)	+0.6	+0.3	-0.3	+0.5	-0.4
in planta	Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=root; GrowthSubstrate=sterile_soil; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days	+0.7	+0.4	-0.3	+0.3	-0.3
in planta	Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=root; GrowthSubstrate=sterile_soil; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=19_days	+0.8	+0.3	+0.2	+0.2	-0.7
plant outgrowth control	Plant outgrowth control	+0.4	-0.1	-0.4	+0.3	+0.8
in planta	Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=19_days	-0.5	+0.3	+0.1	+0.8	+0.5
in planta	Plant=no_plant; PlantTreatment=None; Sample=soil; GrowthSubstrate=liquid_soil_extract; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days	+0.6	-0.1	+0.3	+0.4	+0.7
in planta	Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_liquid; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days	+0.5	+0.6	+0.2	+0.8	+0.4