Fitness for 5 genes in Paraburkholderia graminis OAS925

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	ABIE53_004164	ABIE53_004165	ABIE53_004166	ABIE53_004167	ABIE53_004168
stress	RCH2_defined_glucose_5mM with Lumazine 5 mM	-0.4	-0.2	-1.2	-0.4	-2.0
stress	RCH2_defined_glucose_5mM with Salicylic 5 mM	+0.2	-1.0	+0.6	+0.2	-4.1
stress	RCH2_defined_glucose_5mM with Lumazine 5 mM	-0.3	-0.1	-0.8	-0.8	-2.0
stress	RCH2_defined_glucose_5mM with Indole-3-pyruvic 1 mM	-0.1	-0.5	+0.0	-0.3	-3.1
carbon source	4-Hydroxybenzoic Acid (C)	+0.1	-0.6	-0.4	-0.1	-2.9
motility_chemotaxis	Motility_chemotaxis, R2A; outer cut	-0.0	-2.3	-0.8	-0.1	-0.5
stress	RCH2_defined_glucose_5mM with Indole-3-pyruvic 1 mM	+0.0	-1.0	+0.0	-0.1	-2.6
stress	RCH2_defined_glucose_5mM with 2,3-dihydroxybenzoic 5 mM	+0.1	-0.7	-0.1	+0.1	-2.5
in planta	Plant=Brachypodium_distachyon; PreTreatment=None; PlantTreatment=low_phosphate; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=R2A_with_kan10; Time=21days	-0.4	+0.3	-1.5	-0.8	-0.8
carbon source	4-Hydroxybenzoic Acid (C)	+0.1	-0.2	-0.4	-0.0	-2.5
stress	RCH2_defined_glucose_5mM with Chlorogenic 2 mM	+0.1	-0.7	-0.3	-0.1	-2.1
in planta	Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=liquid_soil_extract; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days	-0.0	+0.2	-0.8	-0.4	-1.8
stress	RCH2_defined_glucose_5mM with Cinnamic 5 mM	+0.3	-2.6	+0.9	+0.5	-1.9
stress	RCH2_defined_glucose_5mM with 2,3-dihydroxybenzoic 5 mM	+0.1	-0.9	+0.1	-0.0	-2.2
stress	RCH2_defined_glucose_5mM with 4-Pyridoxic 5 mM	+0.2	-0.7	+0.1	+0.0	-2.3
stress	RCH2_defined_glucose_5mM with Serotonin 5 mM	+0.1	-0.9	+0.4	-0.1	-1.7
stress	R2A with 3-methyl-3-butenol 4.5 g/L	-0.6	+0.9	-1.3	-0.6	-0.4
stress	RCH2_defined_glucose_5mM with Cinnamic 5 mM	+0.6	-2.2	+1.1	+0.5	-1.8
stress	R2A with 3-methyl-3-butenol 4.5 g/L	-0.4	+0.8	-1.0	-0.5	-0.4
in planta	Plant=no_plant; PlantTreatment=None; Sample=soil; GrowthSubstrate=liquid_soil_extract; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days	-0.2	+1.0	-0.9	-0.6	-0.8
in planta	Plant=switchgrass; PreTreatment=None; PlantTreatment=low_phosphate; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=R2A_with_kan10; Time=21days	-0.2	+1.8	-0.8	-0.2	-1.4
in planta	Plant=no_plant; PlantTreatment=None; Sample=soil; GrowthSubstrate=liquid_soil_extract; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days	-0.7	+1.5	-1.8	-0.5	+1.4
carbon source	Uridine (C)	-0.4	+1.8	-0.9	-0.3	-0.4
carbon source	Uridine (C)	-0.3	+2.1	-1.0	-0.3	-0.6
in planta	Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_liquid; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days	-0.2	+0.9	-1.0	-0.2	+1.3
in planta	Plant=Brachypodium_distachyon; PreTreatment=None; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=R2A_with_kan10; Time=21days	+0.1	-0.6	-0.8	-0.7	+2.7
in planta	Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=liquid_soil_extract; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days	-0.5	+1.3	-0.7	-0.2	+0.8
in planta	Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=19_days	-0.5	+0.6	-1.0	-0.6	+2.4
in planta	Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=root; GrowthSubstrate=sterile_soil; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days	+0.3	-0.5	+0.0	-0.2	+3.7
in planta	Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sterile_soil; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days	+0.2	-0.5	+0.1	+0.2	+3.6