Fitness for 5 genes in Paraburkholderia graminis OAS925

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	ABIE53_004103	ABIE53_004104	ABIE53_004105	ABIE53_004106	ABIE53_004107
stress	R2A with (5z)-4-bromo-5-(bromomethylene)-2(5h)-furanone 10 uM	+0.0	+0.2	-3.7	-3.9	-3.0
stress	R2A with (5z)-4-bromo-5-(bromomethylene)-2(5h)-furanone 10 uM	-0.2	+0.1	-3.6	-3.6	-2.5
biofilm	biofilm; planktonic cells from 96 well plate assay in R2A with C30 compound	+0.1	-0.3	-2.2	-2.4	-1.7
biofilm	biofilm; planktonic cells from 96 well plate assay in R2A with C30 compound	+0.2	-0.2	-2.0	-2.5	-1.6
carbon source	Acetylated xylan 10 g/L (C)	-0.3	-0.9	+0.0	-0.4	-0.9
carbon source	Acetylated xylan 10 g/L (C)	-0.0	-1.0	-0.1	-0.3	-0.8
soil extract	Adenine 5 mM in soil extract	+0.1	-0.4	-0.4	-0.2	-0.6
plant outgrowth control	Plant outgrowth control	-0.4	-1.1	+0.1	-0.0	+0.3
carbon source	Shikimic Acid 5 mM (C)	-0.3	-1.2	+0.2	+0.0	+0.3
in planta	Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=liquid_soil_extract; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days	+0.1	-0.5	+0.5	-0.0	-0.9
r2a outgrowth control	R2A outgrowth control	-0.5	-0.5	+0.3	+0.1	-0.3
in planta	Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_liquid; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days	+0.1	-0.8	-0.2	+0.2	+0.3
in planta	Plant=Brachypodium_distachyon; PreTreatment=None; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=R2A_with_kan10; Time=21days	-0.1	-0.7	+0.4	+0.2	-0.2
stress	R2A with Propan-1-ol 13 g/L	-0.2	+0.4	+0.3	+0.3	-0.9
in planta	Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_liquid; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days	+0.1	-1.1	+0.6	+0.2	+0.3
carbon source	L-Histidine (C)	+0.4	-0.5	+0.3	+0.2	+0.3
carbon source	homovanillyl alcohol and Ethanols	-0.1	-0.4	+0.3	+0.4	+0.5
in planta	Plant=Arabidopsis_thaliana; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days	+0.2	-0.5	+0.4	-0.1	+0.6
in planta	Plant=switchgrass; PreTreatment=None; PlantTreatment=low_phosphate; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=R2A_with_kan10; Time=21days	+0.3	+0.6	-0.4	+0.3	-0.3
in planta	Plant=no_plant; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_liquid; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days	-0.6	+0.3	+0.8	+0.0	+0.2
carbon source	homovanillyl alcohol and Ethanols	-0.2	-0.4	+0.4	+0.4	+0.6
stress	RCH2_defined_glucose_5mM with Serotonin 5 mM	-0.3	-0.3	+0.6	+0.6	+0.3
stress	Growth in presence of pinene	+0.5	+0.6	-0.3	-0.1	+0.3
in planta	Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=root; GrowthSubstrate=liquid_soil_extract; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days	-0.3	+0.4	+0.1	+0.2	+0.8
soil extract	Indole-3-pyruvic 5 mM in soil extract	-0.2	+0.5	+0.6	+0.3	+0.0
in planta	Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=root; GrowthSubstrate=sterile_soil; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days	+0.2	-0.1	+0.6	+0.3	+0.4
stress	RCH2_defined_glucose_5mM with Pyridoxal 0.5 mM	-0.0	-0.3	+0.7	+0.7	+0.4
carbon source	Azelaic 20 mM (C)	+0.1	+0.1	+0.3	+0.2	+0.9
carbon source	Tween 20 (C)	+0.4	+0.5	+0.5	+0.1	+0.1
in planta	Plant=Brachypodium_distachyon; PreTreatment=None; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=R2A_with_kan10; Time=21days	+0.1	+0.4	+0.7	+0.3	+0.7