Fitness for 5 genes in Paraburkholderia graminis OAS925

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500 ntABIE53_003689 and ABIE53_003690 are separated by 39 nucleotidesABIE53_003690 and ABIE53_003691 are separated by 275 nucleotidesABIE53_003691 and ABIE53_003692 are separated by 90 nucleotidesABIE53_003692 and ABIE53_003693 are separated by 121 nucleotides ABIE53_003689: ABIE53_003689 - sec-independent protein translocase protein TatB, at 4,145,523 to 4,146,053 _003689 ABIE53_003690: ABIE53_003690 - sec-independent protein translocase protein TatA, at 4,146,093 to 4,146,335 _003690 ABIE53_003691: ABIE53_003691 - histidine triad (HIT) family protein, at 4,146,611 to 4,146,976 _003691 ABIE53_003692: ABIE53_003692 - putative membrane protein, at 4,147,067 to 4,147,462 _003692 ABIE53_003693: ABIE53_003693 - phosphoribosyl-ATP pyrophosphohydrolase, at 4,147,584 to 4,147,976 _003693
Group Condition ABIE53_003689 ABIE53_003690 ABIE53_003691 ABIE53_003692 ABIE53_003693
motility_chemotaxis Motility_chemotaxis, R2A; outer cut -5.7 N.D. -0.6 -0.2 N.D.
motility_chemotaxis Motility_chemotaxis, R2A; outer cut -5.6 N.D. -0.7 -0.0 N.D.
in planta Plant=no_plant; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -5.8 N.D. -0.2 +0.1 N.D.
stress RCH2_defined_glucose_5mM with Pyridoxal 1 mM -5.0 N.D. -0.5 +0.0 N.D.
in planta Plant=no_plant; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -5.5 N.D. +0.0 +0.0 N.D.
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=liquid_soil_extract; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -4.4 N.D. -0.8 +0.0 N.D.
in planta Plant=no_plant; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -5.3 N.D. -0.2 +0.2 N.D.
in planta Plant=no_plant; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -4.7 N.D. -0.3 -0.0 N.D.
in planta Plant=no_plant; PlantTreatment=None; Sample=soil; GrowthSubstrate=clay; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -5.2 N.D. +0.3 +0.0 N.D.
stress RCH2_defined_glucose_5mM with Cinnamic 5 mM -4.6 N.D. -0.2 -0.0 N.D.
stress RCH2_defined_glucose_5mM with Indole-3-pyruvic 1 mM -4.3 N.D. -0.3 -0.1 N.D.
in planta Plant=no_plant; PlantTreatment=None; Sample=soil; GrowthSubstrate=liquid_soil_extract; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -4.7 N.D. -0.2 +0.2 N.D.
in planta Plant=no_plant; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_liquid; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -4.1 N.D. -0.5 +0.0 N.D.
stress RCH2_defined_glucose_5mM with Pyridoxal 1 mM -4.3 N.D. -0.5 +0.2 N.D.
stress R2A with Tricalcium phosphate 0.5 g/L -4.6 N.D. -0.0 +0.1 N.D.
stress RCH2_defined_glucose_5mM with Salicylic 5 mM -4.3 N.D. -0.1 -0.1 N.D.
stress RCH2_defined_glucose_5mM with Cinnamic 5 mM -3.9 N.D. -0.5 -0.1 N.D.
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=liquid_soil_extract; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -4.0 N.D. -0.3 -0.1 N.D.
in planta Plant=no_plant; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_liquid; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -4.4 N.D. -0.1 +0.2 N.D.
stress R2A with Tricalcium phosphate 0.5 g/L -4.2 N.D. -0.1 +0.0 N.D.
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=root; GrowthSubstrate=liquid_soil_extract; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -3.8 N.D. -0.3 -0.2 N.D.
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=liquid_soil_extract; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=19_days -3.8 N.D. -0.5 +0.0 N.D.
in planta Plant=switchgrass; PreTreatment=None; PlantTreatment=low_phosphate; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=R2A_with_kan10; Time=21days -3.8 N.D. -0.2 -0.2 N.D.
stress RCH2_defined_glucose_5mM with Indole-3-pyruvic 1 mM -3.9 N.D. -0.4 +0.1 N.D.
in planta Plant=no_plant; PlantTreatment=None; Sample=soil; GrowthSubstrate=liquid_soil_extract; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -4.4 N.D. +0.0 +0.3 N.D.
in planta Plant=no_plant; PlantTreatment=None; Sample=soil; GrowthSubstrate=liquid_soil_extract; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -3.9 N.D. -0.1 +0.1 N.D.
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=root; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=19_days -3.3 N.D. -0.6 -0.0 N.D.
stress M9 with Propan-1-ol 13 g/L -3.8 N.D. -0.1 +0.0 N.D.
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=19_days -3.4 N.D. -0.4 +0.1 N.D.
in planta Plant=no_plant; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_liquid; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -3.7 N.D. +0.1 +0.2 N.D.
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