Fitness for 5 genes in Paraburkholderia graminis OAS925

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	ABIE53_003644	ABIE53_003645	ABIE53_003646	ABIE53_003647	ABIE53_003648
in planta	Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_liquid; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days	-1.4	N.D.	+0.1	-0.7	-0.5
stress	RCH2_defined_glucose_5mM with Lumazine 5 mM	-0.8	N.D.	+0.2	-0.1	-1.3
stress	RCH2_defined_glucose_5mM with Lumazine 5 mM	-0.4	N.D.	-0.1	-0.3	-1.1
stress	RCH2_defined_glucose_5mM with caffeic 1 mM	-0.3	N.D.	+0.1	-0.3	-1.3
in planta	Plant=no_plant; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days	-1.5	N.D.	+0.1	+0.3	-0.4
phage	Burk2_1	+0.2	N.D.	-0.2	-0.5	-0.9
in planta	Plant=Brachypodium_distachyon; PreTreatment=None; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=R2A_with_kan10; Time=21days	-1.5	N.D.	-0.1	+0.2	+0.3
phage	Burk1_100	+0.5	N.D.	+0.1	-0.8	-0.9
phage	Burk2_1	+0.2	N.D.	+0.1	-0.6	-0.8
stress	RCH2_defined_glucose_5mM with caffeic 1 mM	+0.6	N.D.	+0.1	-0.2	-1.4
in planta	Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sterile_soil; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days	-0.4	N.D.	+0.4	-0.7	-0.2
stress	RCH2_defined_glucose_5mM with Shikimic Acid 5 mM	-1.1	N.D.	-0.2	+0.1	+0.4
in planta	Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=root; GrowthSubstrate=sterile_soil; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days	+0.5	N.D.	+0.3	-0.8	-0.7
in planta	Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sterile_soil; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days	+0.6	N.D.	+0.2	-0.6	-0.5
in planta	Plant=switchgrass; PreTreatment=None; PlantTreatment=low_phosphate; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=R2A_with_kan10; Time=21days	-1.2	N.D.	+0.2	+0.2	+0.6
in planta	Plant=no_plant; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_liquid; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days	-1.0	N.D.	+0.2	+0.3	+0.9
in planta	Plant=switchgrass; PreTreatment=None; PlantTreatment=low_phosphate; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=R2A_with_kan10; Time=21days	-0.6	N.D.	+0.3	+0.0	+0.8
stress	RCH2_defined_glucose_5mM with Adenine 4 mM	-0.5	N.D.	-0.1	+0.5	+1.2
in planta	Plant=Brachypodium_distachyon; PreTreatment=None; PlantTreatment=low_phosphate; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=R2A_with_kan10; Time=21days	-0.3	N.D.	+0.5	+0.3	+0.7
stress	RCH2_defined_glucose_5mM with Adenine 5 mM	+0.2	N.D.	-0.3	+0.6	+0.9
carbon source	D-Mannose (C)	+0.7	N.D.	-0.3	+0.2	+0.8
carbon source	L-Glutamine (C)	+0.8	N.D.	-0.1	+0.2	+0.8
carbon source	Pectin 10 g/L (C)	+0.7	N.D.	+0.2	+0.3	+0.6
motility_chemotaxis	Motility_chemotaxis; Brachypodium roots in 0.5x MS; outer cut	+1.2	N.D.	+0.2	+0.2	+0.2
stress	R2A with Quartz_sand 500 g/L	+1.1	N.D.	+0.1	+0.2	+0.4
soil extract	Adenine 5 mM in soil extract	+0.7	N.D.	+0.1	+0.6	+0.6
stress	M9 with 3-methyl-2-butenol 2 g/L	+1.1	N.D.	+0.2	+0.4	+0.4
stress	RCH2_defined_glucose_5mM with Adenine 5 mM	+0.3	N.D.	+0.0	+0.6	+1.2
stress	M9 with 3-methyl-2-butenol 2 g/L	+1.4	N.D.	+0.2	+0.2	+0.4
motility_chemotaxis	Motility_chemotaxis, R2A; outer cut	+1.4	N.D.	+0.1	+0.6	+0.2