Fitness for 5 genes in Paraburkholderia graminis OAS925

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	ABIE53_003549	ABIE53_003550	ABIE53_003551	ABIE53_003552	ABIE53_003553
carbon source	D-Galactose (C)	-0.3	-0.3	-2.0	-2.3	-2.6
carbon source	D-Galactose (C)	-0.0	-0.4	-1.7	-2.4	-2.3
carbon source	L-Arabinose (C)	-0.1	-2.8	-3.8	+0.6	+0.0
carbon source	Beta-Lactose (C)	+0.1	-1.4	-2.0	-0.3	-0.8
carbon source	L-Arabinose (C)	-0.1	-3.3	-3.5	+1.8	+1.3
stress	RCH2_defined_glucose_5mM with Pyridoxal 1 mM	+0.7	-1.4	-1.0	-0.7	-0.9
carbon source	Pectin 10 g/L (C)	-0.1	-0.6	-0.9	-0.6	-0.9
carbon source	Pectin 10 g/L (C)	+0.0	-0.6	-1.1	-0.5	-0.8
in planta	Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sterile_soil; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days	+0.1	-0.3	-1.9	+0.1	-0.4
stress	RCH2_defined_glucose_5mM with Pyridoxal 1 mM	+0.7	-1.1	-0.5	-0.8	-0.7
stress	RCH2_defined_glucose_5mM with Lumazine 5 mM	+0.1	-1.0	-0.4	-0.3	-0.8
in planta	Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=root; GrowthSubstrate=sterile_soil; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days	+0.1	+0.0	-2.3	+0.0	-0.2
stress	RCH2_defined_glucose_5mM with Indole-3-pyruvic 1 mM	+0.3	-0.7	-0.5	-0.6	-0.6
stress	RCH2_defined_glucose_5mM with Serotonin 5 mM	+0.5	-0.9	-0.5	-0.6	-0.6
stress	RCH2_defined_glucose_5mM with Pyridoxal 0.5 mM	+0.4	-0.8	-0.6	-0.4	-0.6
stress	RCH2_defined_glucose_5mM with Pyridoxal 0.5 mM	+0.5	-0.9	-0.5	-0.4	-0.6
stress	RCH2_defined_glucose_5mM with 2-Deoxy-D-glucose 5 mM	+0.4	-0.7	-0.5	-0.5	-0.6
stress	RCH2_defined_glucose_5mM with Salicylic 5 mM	+0.4	-0.9	-0.3	-0.5	-0.4
stress	RCH2_defined_glucose_5mM with homovanillyl alcohol 5 mM	+0.4	-0.8	-0.5	-0.4	-0.5
stress	RCH2_defined_glucose_5mM with Cinnamic 5 mM	+0.5	-0.8	-0.5	-0.4	-0.5
stress	RCH2_defined_glucose_5mM with Cinnamic 5 mM	+0.6	-0.9	-0.4	-0.3	-0.3
stress	RCH2_defined_glucose_5mM with Indole-3-pyruvic 1 mM	+0.6	-0.7	+0.1	-0.6	-0.4
in planta	Plant=switchgrass; PreTreatment=None; PlantTreatment=low_phosphate; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=R2A_with_kan10; Time=21days	-0.5	+1.0	-0.6	-0.2	-0.6
in planta	Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_liquid; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days	+0.0	+0.9	-0.3	-0.6	-0.6
in planta	Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=19_days	-0.6	+1.0	-0.4	-0.1	-0.4
in planta	Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_liquid; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days	-0.5	+1.1	+0.1	-0.5	-0.6
in planta	Plant=switchgrass; PreTreatment=None; PlantTreatment=low_phosphate; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=R2A_with_kan10; Time=21days	-0.9	+0.9	+0.6	-0.3	-0.2
in planta	Plant=switchgrass; PreTreatment=None; PlantTreatment=low_phosphate; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=R2A_with_kan10; Time=21days	-0.4	+0.8	+0.5	-0.4	-0.3
carbon source	D-Raffinose (C)	-0.3	+0.8	+0.0	+0.7	+0.5
soil extract	Sucrose 5 mM in soil extract	-0.4	+1.0	+0.3	+0.5	+0.5