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Protein
Homologs
Fitness for 5 genes in
Paraburkholderia graminis OAS925
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
ABIE53_003513 and ABIE53_003514 are separated by 96 nucleotides
ABIE53_003514 and ABIE53_003515 are separated by 10 nucleotides
ABIE53_003515 and ABIE53_003516 are separated by 270 nucleotides
ABIE53_003516 and ABIE53_003517 are separated by 119 nucleotides
ABIE53_003513: ABIE53_003513 - adenylosuccinate lyase, at 3,939,218 to 3,940,606
_003513
ABIE53_003514: ABIE53_003514 - gluconokinase, at 3,940,703 to 3,941,197
_003514
ABIE53_003515: ABIE53_003515 - GntP family gluconate:H+ symporter, at 3,941,208 to 3,942,602
_003515
ABIE53_003516: ABIE53_003516 - 2-dehydro-3-deoxyphosphogluconate aldolase/(4S)-4-hydroxy-2-oxoglutarate aldolase, at 3,942,873 to 3,943,514
_003516
ABIE53_003517: ABIE53_003517 - phosphogluconate dehydratase, at 3,943,634 to 3,945,562
_003517
Group
Condition
ABIE53
_003513
ABIE53
_003514
ABIE53
_003515
ABIE53
_003516
ABIE53
_003517
stress
M9 with Isopropyl alcohol 21 g/L
N.D.
-0.5
-0.2
N.D.
-5.3
stress
M9 with Propan-1-ol 13 g/L
N.D.
-0.6
+0.0
N.D.
-5.4
stress
M9 with 3-methyl-3-butenol 4.5 g/L
N.D.
-0.5
-0.0
N.D.
-4.9
m9 no stress control
M9 no stress control
N.D.
-0.0
-0.1
N.D.
-5.1
stress
M9 with Propan-1-ol 13 g/L
N.D.
-0.1
-0.0
N.D.
-4.9
stress
M9 with Ethanol 2.5 vol%
N.D.
-0.1
-0.0
N.D.
-4.8
stress
M9 with Ethanol 2.5 vol%
N.D.
-0.0
-0.0
N.D.
-4.8
stress
RCH2_defined_glucose_5mM with 4-Pyridoxic 5 mM
N.D.
-0.4
+0.1
N.D.
-4.6
m9 no stress control
M9 no stress control
N.D.
+0.1
-0.1
N.D.
-4.8
stress
RCH2_defined_glucose_5mM with Sucrose 5 mM
N.D.
-0.3
-0.1
N.D.
-4.4
m9 no stress control
M9 no stress control
N.D.
+0.2
-0.0
N.D.
-4.9
stress
RCH2_defined_glucose_5mM with Indole-3-pyruvic 1 mM
N.D.
-0.5
+0.1
N.D.
-4.3
stress
M9 with 3-methyl-3-butenol 4.5 g/L
N.D.
-0.5
-0.1
N.D.
-4.1
stress
RCH2_defined_glucose_5mM with Pyridoxal 1 mM
N.D.
-0.0
+0.0
N.D.
-4.7
carbon source
Xylitol (C)
N.D.
-0.1
-0.1
N.D.
-4.4
stress
M9 with Isopropyl alcohol 21 g/L
N.D.
-0.2
-0.1
N.D.
-4.4
stress
M9 with Ethanol 2.5 vol%
N.D.
-0.6
-0.0
N.D.
-4.0
stress
M9 with Isopropyl alcohol 21 g/L
N.D.
-0.2
-0.2
N.D.
-4.2
stress
RCH2_defined_glucose_5mM with Chlorogenic 1 mM
N.D.
-0.2
-0.1
N.D.
-4.3
carbon source
D-Trehalose (C)
N.D.
-0.8
-0.1
N.D.
-3.6
stress
M9 with 3-methyl-3-butenol 4.5 g/L
N.D.
+0.0
-0.2
N.D.
-4.4
stress
RCH2_defined_glucose_5mM with Indole-3-pyruvic 1 mM
N.D.
+0.0
+0.1
N.D.
-4.5
stress
RCH2_defined_glucose_5mM with Cinnamic 5 mM
N.D.
-0.2
+0.2
N.D.
-4.4
stress
RCH2_defined_glucose_5mM with caffeic 0.5 mM
N.D.
-0.7
+0.2
N.D.
-3.9
stress
RCH2_defined_glucose_5mM with 2,3-dihydroxybenzoic 5 mM
N.D.
-0.4
+0.2
N.D.
-4.0
stress
RCH2_defined_glucose_5mM with 2-Deoxy-D-glucose 5 mM
N.D.
-0.3
+0.2
N.D.
-4.2
stress
RCH2_defined_glucose_5mM with caffeic 1 mM
N.D.
-0.5
+0.2
N.D.
-3.8
stress
RCH2_defined_glucose_5mM with Lumichrome 5 mM
N.D.
+0.1
+0.2
N.D.
-4.3
stress
RCH2_defined_glucose_5mM with Salicylic 5 mM
N.D.
+0.2
+0.2
N.D.
-4.4
stress
RCH2_defined_glucose_5mM with Shikimic Acid 5 mM
N.D.
+0.4
-0.0
N.D.
-4.2
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