Fitness for 5 genes in Paraburkholderia graminis OAS925

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500 ntABIE53_003464 and ABIE53_003465 are separated by 506 nucleotidesABIE53_003465 and ABIE53_003466 are separated by 318 nucleotidesABIE53_003466 and ABIE53_003467 are separated by 242 nucleotidesABIE53_003467 and ABIE53_003468 are separated by 200 nucleotides ABIE53_003464: ABIE53_003464 - hypothetical protein, at 3,891,685 to 3,892,512 _003464 ABIE53_003465: ABIE53_003465 - DeoR family glycerol-3-phosphate regulon repressor, at 3,893,019 to 3,893,741 _003465 ABIE53_003466: ABIE53_003466 - hypothetical protein, at 3,894,060 to 3,894,257 _003466 ABIE53_003467: ABIE53_003467 - hypothetical protein, at 3,894,500 to 3,894,874 _003467 ABIE53_003468: ABIE53_003468 - glycerol-3-phosphate dehydrogenase, at 3,895,075 to 3,896,604 _003468
Group Condition ABIE53_003464 ABIE53_003465 ABIE53_003466 ABIE53_003467 ABIE53_003468
in planta Plant=no_plant; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.7 -3.5 -2.0 +0.4 -0.4
in planta Plant=no_plant; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.8 -3.2 -1.6 +0.0 -0.4
in planta Plant=no_plant; PlantTreatment=None; Sample=soil; GrowthSubstrate=liquid_soil_extract; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.6 -4.9 -0.2 +0.3 -0.9
in planta Plant=no_plant; PlantTreatment=None; Sample=soil; GrowthSubstrate=liquid_soil_extract; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +1.2 -4.4 -3.0 -1.8 +4.3
stress RCH2_defined_glucose_5mM with Pyridoxal 1 mM -3.5 -1.1 +0.6 +0.2 +0.7
stress RCH2_defined_glucose_5mM with Pyridoxal 1 mM -3.4 -1.1 +0.3 +0.1 +1.0
in planta Plant=no_plant; PlantTreatment=None; Sample=soil; GrowthSubstrate=liquid_soil_extract; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.3 -4.5 +0.5 -0.0 +2.0
stress RCH2_defined_glucose_5mM with Adenine 5 mM +1.2 -1.3 -2.2 -0.2 +1.2
carbon source Glycerol (C) -0.0 +2.3 -0.5 +0.2 -3.1
stress RCH2_defined_glucose_5mM with Adenine 2 mM +1.3 -1.3 -2.1 +0.0 +1.2
stress RCH2_defined_glucose_5mM with Lumazine 5 mM +0.8 -3.6 +0.3 -0.1 +2.0
stress RCH2_defined_glucose_5mM with Lumazine 5 mM +0.9 -2.3 -0.9 -0.2 +2.0
stress RCH2_defined_glucose_5mM with caffeic 0.5 mM +0.7 -2.9 -1.1 -0.1 +3.2
stress RCH2_defined_glucose_5mM with caffeic 0.5 mM +0.7 -2.1 -1.2 -0.1 +2.7
carbon source Glycerol (C) -0.3 +2.2 +0.9 +0.3 -3.2
stress RCH2_defined_glucose_5mM with Chlorogenic 2 mM +0.9 -2.3 -0.2 -0.1 +2.0
stress RCH2_defined_glucose_5mM with caffeic 1 mM +0.5 -3.5 -0.4 -0.2 +4.0
stress RCH2_defined_glucose_5mM with Chlorogenic 2 mM +0.9 -2.5 +0.5 +0.1 +1.9
soil extract Indole-3-pyruvic 5 mM in soil extract +1.6 -2.9 +0.0 -0.0 +2.4
soil extract Indole-3-pyruvic 5 mM in soil extract +1.3 -2.0 -0.2 -0.3 +2.4
stress RCH2_defined_glucose_5mM with caffeic 1 mM +0.6 -3.1 -0.2 +0.0 +4.1
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=liquid_soil_extract; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +2.9 -2.1 +0.8 -0.0 +1.0
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_liquid; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.1 +4.7 -1.7 +0.3 -0.3
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=liquid_soil_extract; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.4 +4.3 +0.0 +0.5 -0.6
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_liquid; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.9 +4.4 -0.8 +0.4 -0.2
in planta Plant=switchgrass; PreTreatment=None; PlantTreatment=low_phosphate; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=R2A_with_kan10; Time=21days +0.8 +3.5 +1.2 +0.3 +0.5
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=19_days -0.6 +6.5 +0.6 +0.2 +0.1
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_liquid; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.5 +7.4 +0.3 +0.4 -0.6
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=19_days -0.1 +7.7 +0.7 +0.1 +0.1
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_liquid; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.7 +8.2 +0.8 +0.2 -0.6
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