Fitness for 5 genes in Paraburkholderia graminis OAS925

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 488 experiments or choose conditions or try the comparative fitness browser

500 ntABIE53_003432 and ABIE53_003433 are separated by 44 nucleotidesABIE53_003433 and ABIE53_003434 are separated by 167 nucleotidesABIE53_003434 and ABIE53_003435 are separated by 168 nucleotidesABIE53_003435 and ABIE53_003436 are separated by 40 nucleotides ABIE53_003432: ABIE53_003432 - branched-chain amino acid aminotransferase, at 3,860,560 to 3,861,483 _003432 ABIE53_003433: ABIE53_003433 - putative Zn-finger protein, at 3,861,528 to 3,861,722 _003433 ABIE53_003434: ABIE53_003434 - heptosyltransferase-2, at 3,861,890 to 3,862,915 _003434 ABIE53_003435: ABIE53_003435 - ketosteroid isomerase-like protein, at 3,863,084 to 3,863,530 _003435 ABIE53_003436: ABIE53_003436 - putative alpha/beta-fold hydrolase, at 3,863,571 to 3,864,710 _003436
Group Condition ABIE53_003432 ABIE53_003433 ABIE53_003434 ABIE53_003435 ABIE53_003436
stress RCH2_defined_glucose_5mM with Lumazine 5 mM -0.4 -1.1 -5.3 -0.8 -0.7
stress RCH2_defined_glucose_5mM with Salicylic 5 mM -1.0 -1.2 -4.9 +0.1 -0.3
stress RCH2_defined_glucose_5mM with homovanillyl alcohol 5 mM -0.7 -1.0 -5.0 -0.2 -0.3
stress RCH2_defined_glucose_5mM with 2,3-dihydroxybenzoic 5 mM -0.7 -0.8 -5.2 +0.2 -0.5
stress RCH2_defined_glucose_5mM with Lumazine 5 mM -0.5 -1.2 -4.1 -0.5 -0.5
carbon source 4-Hydroxybenzoic Acid (C) -0.5 -0.8 -4.3 -0.0 -1.0
motility_chemotaxis Motility_chemotaxis, R2A; outer cut -0.9 -0.9 -5.2 +0.3 -0.1
in planta Plant=no_plant; PlantTreatment=None; Sample=soil; GrowthSubstrate=clay; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.8 -0.4 -5.2 -0.2 +0.0
stress RCH2_defined_glucose_5mM with Serotonin 5 mM -0.7 -1.0 -4.5 -0.0 -0.3
stress RCH2_defined_glucose_5mM with Indole-3-pyruvic 1 mM -0.6 -1.2 -4.7 +0.1 -0.1
stress RCH2_defined_glucose_5mM with 2,3-dihydroxybenzoic 5 mM -0.5 -0.4 -5.0 +0.1 -0.5
stress RCH2_defined_glucose_5mM with Pyridoxal 0.5 mM -0.7 -0.6 -4.9 +0.1 -0.2
motility_chemotaxis Motility_chemotaxis, R2A; outer cut -0.9 -0.5 -5.1 +0.2 +0.0
carbon source shik 5mM -0.7 -0.7 -4.3 -0.2 -0.4
stress RCH2_defined_glucose_5mM with homovanillyl alcohol 5 mM -0.6 -1.1 -4.3 +0.1 -0.2
nitrogen source Ammonium chloride 30 mM (N) -0.5 -0.8 -4.8 +0.1 -0.1
stress RCH2_defined_glucose_5mM with Cinnamic 5 mM -0.6 -0.6 -5.1 +0.5 -0.1
stress RCH2_defined_glucose_5mM with Indole-3-pyruvic 1 mM -0.8 -1.1 -4.1 +0.3 -0.2
stress RCH2_defined_glucose_5mM with Cinnamic 5 mM -0.8 -0.9 -4.4 +0.4 -0.1
carbon source D-Glucuronic Acid (C) +1.5 +2.1 +2.7 +0.0 -0.3
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_liquid; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +1.2 +1.5 +4.0 +0.1 +0.0
biofilm biofilm; attached cells from 96 well plate assay in R2A +1.4 +1.9 +4.0 +0.1 -0.0
biofilm biofilm; attached cells from 96 well plate assay in R2A +1.4 +1.8 +3.9 +0.1 +0.2
biofilm biofilm; planktonic cells from 96 well plate assay in R2A with C30 compound +1.3 +2.2 +4.2 +0.0 -0.1
biofilm biofilm; planktonic cells from 96 well plate assay in R2A +1.6 +2.0 +4.3 -0.0 +0.1
biofilm biofilm; planktonic cells from 96 well plate assay in R2A with C30 compound +1.4 +2.0 +4.5 +0.2 +0.2
carbon source D-Glucuronic Acid (C) +1.9 +2.6 +4.1 +0.1 -0.1
biofilm biofilm; planktonic cells from 96 well plate assay in R2A +1.7 +2.2 +4.4 -0.0 +0.2
carbon source L-Proline (C) +2.3 +2.8 +3.5 +0.0 +0.2
carbon source L-Histidine (C) +2.5 +3.5 +4.7 +0.3 -0.2
remove
ABIE53_003432
plot
remove
ABIE53_003433
plot
remove
ABIE53_003434
remove
ABIE53_003435
plot
remove
ABIE53_003436
plot