Fitness for 5 genes in Paraburkholderia graminis OAS925

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500 ntABIE53_003400 and ABIE53_003401 are separated by 68 nucleotidesABIE53_003401 and ABIE53_003402 are separated by 38 nucleotidesABIE53_003402 and ABIE53_003403 are separated by 229 nucleotidesABIE53_003403 and ABIE53_003404 are separated by 211 nucleotides ABIE53_003400: ABIE53_003400 - zinc/manganese transport system permease protein, at 3,824,759 to 3,825,541 _003400 ABIE53_003401: ABIE53_003401 - S-formylglutathione hydrolase, at 3,825,610 to 3,826,476 _003401 ABIE53_003402: ABIE53_003402 - S-(hydroxymethyl)glutathione dehydrogenase/alcohol dehydrogenase, at 3,826,515 to 3,827,621 _003402 ABIE53_003403: ABIE53_003403 - xylulokinase, at 3,827,851 to 3,829,320 _003403 ABIE53_003404: ABIE53_003404 - hypothetical protein, at 3,829,532 to 3,829,729 _003404
Group Condition ABIE53_003400 ABIE53_003401 ABIE53_003402 ABIE53_003403 ABIE53_003404
stress RCH2_defined_glucose_5mM with Cinnamic 5 mM -3.4 -0.1 +0.2 -0.1 -0.7
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sterile_soil; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -3.7 +0.1 -0.3 -0.0 -0.1
stress RCH2_defined_glucose_5mM with Lumazine 5 mM -2.2 +0.2 +0.1 -0.6 -1.4
stress RCH2_defined_glucose_5mM with Lumazine 5 mM -2.6 +0.0 +0.2 -1.0 -0.5
stress RCH2_defined_glucose_5mM with Salicylic 5 mM -3.3 +0.0 -0.0 +0.1 -0.6
stress RCH2_defined_glucose_5mM with Pyridoxal 1 mM -3.2 -0.1 -0.0 -0.1 -0.4
stress RCH2_defined_glucose_5mM with Pyridoxal 0.5 mM -3.5 -0.1 +0.1 +0.0 -0.3
stress RCH2_defined_glucose_5mM with Indole-3-pyruvic 1 mM -2.7 -0.6 -0.2 +0.2 -0.4
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sterile_soil; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -3.4 +0.2 -0.1 -0.3 -0.1
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=root; GrowthSubstrate=sterile_soil; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=19_days -3.1 +0.5 +0.4 +0.0 -1.2
stress RCH2_defined_glucose_5mM with Pyridoxal 1 mM -3.3 +0.1 -0.1 +0.2 -0.2
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=root; GrowthSubstrate=liquid_soil_extract; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=19_days -3.4 +0.1 +0.1 -0.0 -0.1
stress R2A with PEG 6000 16 vol% -2.0 -1.5 -3.4 +1.1 +2.4
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=liquid_soil_extract; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -2.1 -0.2 -0.0 +0.2 -1.1
in planta Plant=Medicago_truncatula; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sterile_soil; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=19_days -3.2 -0.2 +0.1 +0.5 -0.3
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=liquid_soil_extract; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -3.4 +0.1 +0.1 -0.2 +0.3
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=root; GrowthSubstrate=liquid_soil_extract; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=19_days -3.5 -0.0 +0.2 +0.2 +0.1
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=root; GrowthSubstrate=sterile_soil; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -3.2 +0.2 -0.2 +0.2 +0.0
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=root; GrowthSubstrate=liquid_soil_extract; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -3.4 +0.1 -0.0 -0.1 +0.5
stress R2A with PEG 6000 16 vol% -2.0 -1.1 -2.2 +0.8 +1.6
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=root; GrowthSubstrate=sterile_soil; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -3.3 +0.1 -0.1 +0.1 +0.3
soil extract Indole-3-pyruvic 5 mM in soil extract -1.5 -0.3 -1.5 +0.4 +0.1
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sterile_soil; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -3.2 +0.0 -0.0 -0.2 +0.5
stress R2A with PEG 6000 16 vol% -1.0 -1.1 -2.6 +0.7 +1.5
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=liquid_soil_extract; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -3.3 +0.3 +0.4 -0.2 +0.6
stress R2A with PEG 6000 16 vol% -0.8 -0.8 -2.4 +0.8 +1.7
soil extract 2,3-dihydroxybenzoic 5 mM in soil extract +3.1 +0.0 +0.5 +0.1 -0.0
carbon source D-Sorbitol (C) +1.9 +0.2 +0.6 +0.8 +0.6
soil extract 2,3-dihydroxybenzoic 5 mM in soil extract +3.4 +0.2 +0.5 +0.2 +0.1
carbon source D-Glucosamine Hydrochloride (C) +3.3 +0.4 +0.2 +0.5 +0.1
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