Fitness for 5 genes in Paraburkholderia graminis OAS925

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500 ntABIE53_003341 and ABIE53_003342 are separated by 294 nucleotidesABIE53_003342 and ABIE53_003343 are separated by 312 nucleotidesABIE53_003343 and ABIE53_003344 are separated by 206 nucleotidesABIE53_003344 and ABIE53_003345 are separated by 579 nucleotides ABIE53_003341: ABIE53_003341 - hypothetical protein, at 3,763,732 to 3,765,483 _003341 ABIE53_003342: ABIE53_003342 - hypothetical protein, at 3,765,778 to 3,766,353 _003342 ABIE53_003343: ABIE53_003343 - Fe-Mn family superoxide dismutase, at 3,766,666 to 3,767,244 _003343 ABIE53_003344: ABIE53_003344 - exodeoxyribonuclease VII large subunit, at 3,767,451 to 3,768,842 _003344 ABIE53_003345: ABIE53_003345 - tetraacyldisaccharide 4'-kinase, at 3,769,422 to 3,770,438 _003345
Group Condition ABIE53_003341 ABIE53_003342 ABIE53_003343 ABIE53_003344 ABIE53_003345
in planta Plant=switchgrass; PreTreatment=None; PlantTreatment=low_phosphate; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=R2A_with_kan10; Time=21days -0.1 -0.2 N.D. -1.4 N.D.
in planta Plant=Brachypodium_distachyon; PreTreatment=None; PlantTreatment=low_phosphate; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=R2A_with_kan10; Time=21days -0.3 -0.1 N.D. -0.6 N.D.
in planta Plant=Brachypodium_distachyon; PreTreatment=None; PlantTreatment=low_phosphate; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=R2A_with_kan10; Time=21days +0.2 -0.5 N.D. -0.6 N.D.
stress RCH2_defined_glucose_5mM with Chlorogenic 0.5 mM -0.0 -0.4 N.D. -0.4 N.D.
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=liquid_soil_extract; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.2 -0.2 N.D. -0.8 N.D.
stress RCH2_defined_glucose_5mM with Adenine 2 mM +0.1 -0.6 N.D. -0.2 N.D.
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=root; GrowthSubstrate=liquid_soil_extract; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.2 -0.3 N.D. -0.6 N.D.
carbon source D-Mannose (C) -0.1 -0.6 N.D. +0.0 N.D.
in planta Plant=no_plant; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_liquid; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.1 -0.3 N.D. -0.5 N.D.
carbon source D-Alanine (C) +0.0 -0.6 N.D. -0.1 N.D.
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=liquid_soil_extract; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.3 -0.2 N.D. -0.7 N.D.
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=liquid_soil_extract; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.2 -0.0 N.D. -0.8 N.D.
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=liquid_soil_extract; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=19_days -0.1 +0.1 N.D. -0.6 N.D.
carbon source Uridine (C) +0.1 -0.5 N.D. -0.1 N.D.
stress R2A with Chloride 200 mM +0.1 -0.4 N.D. -0.2 N.D.
in planta Plant=no_plant; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.1 -0.3 N.D. -0.4 N.D.
carbon source L-Threonine (C) +0.1 -0.4 N.D. -0.2 N.D.
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=liquid_soil_extract; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.3 -0.4 N.D. -0.4 N.D.
stress RCH2_defined_glucose_5mM with 2,3-dihydroxybenzoic 5 mM +0.2 -0.3 N.D. -0.3 N.D.
stress RCH2_defined_glucose_5mM with Serotonin 5 mM +0.2 -0.2 N.D. -0.3 N.D.
stress RCH2_defined_glucose_5mM with D,L-Malic Acid 5 mM +0.1 -0.5 N.D. +0.1 N.D.
in planta Plant=Arabidopsis_thaliana; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.2 -0.2 N.D. -0.3 N.D.
in planta Plant=no_plant; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.2 +0.1 N.D. -0.6 N.D.
carbon source D-Galactose (C) +0.2 -0.3 N.D. -0.2 N.D.
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.2 +0.2 N.D. -0.3 N.D.
in planta Plant=switchgrass; PreTreatment=None; PlantTreatment=low_phosphate; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=R2A_with_kan10; Time=21days -0.1 +0.5 N.D. -0.1 N.D.
stress RCH2_defined_glucose_5mM with Abietic Acid 5 mM +0.2 +0.3 N.D. -0.3 N.D.
in planta Plant=Arabidopsis_thaliana; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.3 -0.3 N.D. +0.3 N.D.
in planta Plant=Brachypodium_distachyon; PreTreatment=None; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=R2A_with_kan10; Time=21days +0.1 +0.5 N.D. -0.2 N.D.
in planta Plant=no_plant; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_liquid; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.4 +0.2 N.D. +0.2 N.D.
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