Fitness for 5 genes in Paraburkholderia graminis OAS925

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500 ntABIE53_003295 and ABIE53_003296 are separated by 202 nucleotidesABIE53_003296 and ABIE53_003297 are separated by 72 nucleotidesABIE53_003297 and ABIE53_003298 overlap by 4 nucleotidesABIE53_003298 and ABIE53_003299 are separated by 117 nucleotides ABIE53_003295: ABIE53_003295 - stearoyl-CoA desaturase (delta-9 desaturase), at 3,714,150 to 3,715,346 _003295 ABIE53_003296: ABIE53_003296 - small-conductance mechanosensitive channel, at 3,715,549 to 3,716,922 _003296 ABIE53_003297: ABIE53_003297 - 16S rRNA (cytosine967-C5)-methyltransferase, at 3,716,995 to 3,718,254 _003297 ABIE53_003298: ABIE53_003298 - phosphoribosylglycinamide formyltransferase-1, at 3,718,251 to 3,718,904 _003298 ABIE53_003299: ABIE53_003299 - riboflavin kinase/FMN adenylyltransferase, at 3,719,022 to 3,720,017 _003299
Group Condition ABIE53_003295 ABIE53_003296 ABIE53_003297 ABIE53_003298 ABIE53_003299
m9 no stress control M9 no stress control N.D. -0.1 +0.1 -5.0 N.D.
m9 no stress control M9 no stress control N.D. -0.0 -0.0 -4.5 N.D.
m9 no stress control M9 no stress control N.D. +0.0 -0.1 -4.4 N.D.
stress control RCH2_defined_glucose_5mM with Dimethyl Sulfoxide 1 vol% N.D. -0.1 -0.2 -3.2 N.D.
carbon source D,L-Malic Acid (C) N.D. -0.0 -0.2 -3.2 N.D.
carbon source propionate (C) N.D. -0.1 -0.3 -2.9 N.D.
stress M9 with Chloride 200 mM N.D. -0.0 +0.4 -3.6 N.D.
carbon source D,L-Malic Acid (C) N.D. -0.2 -0.3 -2.8 N.D.
stress RCH2_defined_glucose_5mM with Nerolidol 5 mM N.D. -0.1 -0.1 -3.0 N.D.
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=clay; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days N.D. +0.1 +0.2 -3.5 N.D.
stress RCH2_defined_glucose_5mM with D,L-Malic Acid 5 mM N.D. +0.0 +0.0 -3.2 N.D.
stress RCH2_defined_glucose_5mM with 2-Deoxy-D-glucose 5 mM N.D. -0.2 +0.2 -3.2 N.D.
stress RCH2_defined_glucose_5mM with Pyridoxal 0.5 mM N.D. +0.1 -0.1 -3.1 N.D.
m9 no stress control M9 no stress control N.D. -0.0 +0.2 -3.2 N.D.
stress RCH2_defined_glucose_5mM with L-Proline 5 mM N.D. +0.0 +0.2 -3.2 N.D.
carbon source Tween 20 (C) N.D. -0.3 -0.2 -2.4 N.D.
stress RCH2_defined_glucose_5mM with Sucrose 5 mM N.D. +0.1 +0.1 -3.0 N.D.
stress RCH2_defined_glucose_5mM with Sucrose 5 mM N.D. +0.0 +0.3 -3.1 N.D.
stress RCH2_defined_glucose_5mM with Shikimic Acid 5 mM N.D. +0.1 +0.2 -3.0 N.D.
carbon source Fumarate (C) N.D. -0.1 +0.1 -2.8 N.D.
carbon source fumaric 20mM N.D. -0.1 +0.3 -2.9 N.D.
stress M9 with Chloride 200 mM N.D. +0.2 +0.1 -2.9 N.D.
stress control RCH2_defined_glucose_5mM with Dimethyl Sulfoxide 1 vol% N.D. +0.1 +0.3 -3.0 N.D.
stress control RCH2_defined_glucose_5mM with Dimethyl Sulfoxide 1 vol% N.D. -0.1 +0.3 -2.7 N.D.
carbon source shik 20mM N.D. -0.0 +0.3 -2.6 N.D.
stress M9 with Chloride 200 mM N.D. -0.1 +0.4 -2.6 N.D.
carbon source succinate (C) N.D. +0.4 +0.6 -2.7 N.D.
carbon source Shikimic Acid 5 mM (C) N.D. +0.2 +0.6 -2.5 N.D.
soil extract Indole-3-pyruvic 5 mM in soil extract N.D. +0.0 +0.5 +2.6 N.D.
in planta Plant=no_plant; PlantTreatment=None; Sample=soil; GrowthSubstrate=liquid_soil_extract; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days N.D. +0.4 -0.0 +4.9 N.D.
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