Fitness for 5 genes in Paraburkholderia graminis OAS925

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500 ntABIE53_003261 and ABIE53_003262 are separated by 87 nucleotidesABIE53_003262 and ABIE53_003263 are separated by 74 nucleotidesABIE53_003263 and ABIE53_003264 are separated by 266 nucleotidesABIE53_003264 and ABIE53_003853 are separated by 106 nucleotides ABIE53_003261: ABIE53_003261 - undecaprenyl-diphosphatase, at 3,678,253 to 3,679,095 _003261 ABIE53_003262: ABIE53_003262 - hypothetical protein, at 3,679,183 to 3,679,773 _003262 ABIE53_003263: ABIE53_003263 - Fe-S-cluster containining protein, at 3,679,848 to 3,680,156 _003263 ABIE53_003264: ABIE53_003264 - oxygen-independent coproporphyrinogen-3 oxidase, at 3,680,423 to 3,681,808 _003264 ABIE53_003853: ABIE53_003853 - tRNA-Leu, at 3,681,915 to 3,681,999 _003853
Group Condition ABIE53_003261 ABIE53_003262 ABIE53_003263 ABIE53_003264 ABIE53_003853
phage NP -5.0 -0.3 N.D. +0.1 N.D.
phage Burk1_1 -5.2 +0.2 N.D. +0.1 N.D.
phage Burk2_1 -5.1 +0.1 N.D. +0.1 N.D.
phage Burk1_1 -4.9 +0.0 N.D. +0.0 N.D.
phage Burk1_10 -4.9 -0.1 N.D. +0.2 N.D.
phage Burk1_100 -4.6 -0.2 N.D. +0.1 N.D.
phage Burk2_10 -4.8 -0.0 N.D. +0.1 N.D.
phage Burk2_10 -4.8 -0.0 N.D. +0.2 N.D.
phage Burk2_1 -4.4 +0.0 N.D. +0.0 N.D.
phage Burk1_100 -4.5 -0.1 N.D. +0.1 N.D.
pH R2A pH 8.3 -4.3 +0.0 N.D. -0.1 N.D.
stress RCH2_defined_glucose_5mM with Indole-3-pyruvic 1 mM -4.2 -0.0 N.D. +0.0 N.D.
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=liquid_soil_extract; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -4.2 +0.2 N.D. -0.0 N.D.
pH R2A pH 8.3 -4.0 +0.0 N.D. +0.0 N.D.
stress RCH2_defined_glucose_5mM with caffeic 1 mM -4.0 +0.0 N.D. +0.0 N.D.
phage Burk1_10 -4.1 +0.1 N.D. +0.0 N.D.
stress RCH2_defined_glucose_5mM with caffeic 1 mM -4.0 -0.0 N.D. +0.1 N.D.
r2a outgrowth control R2A outgrowth control -3.7 -0.0 N.D. -0.0 N.D.
stress RCH2_defined_glucose_5mM with Indole-3-pyruvic 1 mM -3.5 -0.1 N.D. -0.1 N.D.
motility_chemotaxis Motility_chemotaxis, R2A; outer cut -3.4 -0.4 N.D. +0.1 N.D.
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=liquid_soil_extract; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -3.8 +0.1 N.D. +0.1 N.D.
carbon source L-Malic (C) -3.6 +0.1 N.D. -0.0 N.D.
carbon source L-Glutamic (C) -3.6 +0.1 N.D. +0.1 N.D.
r2a outgrowth control R2A outgrowth control -3.3 +0.1 N.D. -0.2 N.D.
stress R2A with Chloride 200 mM -3.3 +0.1 N.D. +0.1 N.D.
stress RCH2_defined_glucose_5mM with Abietic Acid 5 mM -3.0 +0.1 N.D. -0.2 N.D.
nitrogen source 1-aminocyclopropane-1-carboxylate (ACC) (N) -3.1 +0.2 N.D. -0.0 N.D.
mixed community Mixed culture; Alteromonas stellipolaris PQQ42 1:1 starting OD to Burkholderia -3.2 +0.1 N.D. +0.1 N.D.
stress RCH2_defined_glucose_5mM with caffeic 0.5 mM -3.2 +0.1 N.D. +0.1 N.D.
replicable vector efficiency Conjugation on LB_DAP agar plate with WM3064 carrying pBBR1-MCS5; outgrowth in LB_gent50 -2.6 +0.2 N.D. -0.5 N.D.
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