Fitness for 5 genes in Paraburkholderia graminis OAS925

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	ABIE53_003214	ABIE53_003215	ABIE53_003216	ABIE53_003217	ABIE53_003218
in planta	Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=root; GrowthSubstrate=sterile_soil; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days	N.D.	+0.1	-1.0	-0.5	-2.7
r2a outgrowth control	R2A outgrowth control	N.D.	+0.2	+0.1	-0.8	-3.5
stress	M9 with Chloride 200 mM	N.D.	-0.0	-0.0	-0.5	-3.2
stress	M9 with Chloride 200 mM	N.D.	-0.0	-0.1	-0.4	-3.1
in planta	Plant=switchgrass; PreTreatment=None; PlantTreatment=low_phosphate; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=R2A_with_kan10; Time=21days	N.D.	-0.1	-0.3	-0.3	-2.9
stress	M9 with 3-methyl-2-butenol 2 g/L	N.D.	+0.2	+0.6	+0.2	-4.5
in planta	Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=root; GrowthSubstrate=sterile_soil; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days	N.D.	+0.1	-1.0	+0.2	-2.5
in planta	Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sterile_soil; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days	N.D.	+0.1	-0.9	+0.2	-2.5
carbon source	L-Phenylalanine (C)	N.D.	+0.0	+0.2	-0.5	-2.7
stress	RCH2_defined_glucose_5mM with caffeic 1 mM	N.D.	-0.2	-0.3	+0.1	-2.5
carbon source	D-Glucosamine Hydrochloride (C)	N.D.	+0.0	+0.3	-0.9	-2.4
nitrogen source	Ammonium chloride 0.5 mM (N)	N.D.	+0.1	+0.1	-0.7	-2.4
soil extract	Lumazine 5 mM in soil extract	N.D.	-0.0	+0.2	+0.0	-3.0
in planta	Plant=switchgrass; PreTreatment=None; PlantTreatment=low_phosphate; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=R2A_with_kan10; Time=21days	N.D.	-0.1	-0.4	+0.6	-2.8
stress	RCH2_defined_glucose_5mM with Sucrose 5 mM	N.D.	-0.0	+0.6	-0.4	-2.5
carbon source	D,L-Malic Acid (C)	N.D.	-0.2	+0.2	+0.3	-2.6
in planta	Plant=switchgrass; PreTreatment=None; PlantTreatment=low_phosphate; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=R2A_with_kan10; Time=21days	N.D.	+0.2	-0.3	+0.6	-2.8
carbon source	D-Xylose (C)	N.D.	+0.0	+0.4	+0.1	-2.7
carbon source	L-Alanine (C)	N.D.	-0.1	+0.2	+0.4	-2.6
in planta	Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=clay; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days	N.D.	+0.1	-0.1	+0.6	-2.5
stress	RCH2_defined_glucose_5mM with Indole-3-pyruvic 1 mM	N.D.	-0.1	+0.1	+0.8	-2.7
carbon source	4-Hydroxybenzoic Acid (C)	N.D.	-0.1	+0.6	+0.5	-2.8
stress	RCH2_defined_glucose_5mM with Chlorogenic 1 mM	N.D.	+0.1	+0.6	+0.1	-2.5
stress	RCH2_defined_glucose_5mM with Serotonin 5 mM	N.D.	-0.1	+0.6	+0.4	-2.5
carbon source	Trisodium citrate (C)	N.D.	+0.0	+0.5	+0.5	-2.5
stress	RCH2_defined_glucose_5mM with Adenine 2 mM	N.D.	-0.0	+0.8	-0.1	-2.2
in planta	Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sterile_soil; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days	N.D.	+0.0	-1.3	-1.0	+1.0
stress	RCH2_defined_glucose_5mM with Adenine 2 mM	N.D.	-0.0	+0.9	+0.4	-2.4
plant outgrowth control	Plant outgrowth control	N.D.	-0.0	+0.2	-0.4	+3.0
in planta	Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_liquid; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days	N.D.	+0.2	+0.4	-0.1	+2.4