Fitness for 5 genes in Paraburkholderia graminis OAS925

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	ABIE53_003192	ABIE53_003193	ABIE53_003194	ABIE53_003195	ABIE53_003196
in planta	Plant=Brachypodium_distachyon; PreTreatment=None; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=R2A_with_kan10; Time=21days	-0.3	+0.5	-0.0	-2.5	-0.7
in planta	Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sterile_soil; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days	-0.3	-0.3	-0.0	-1.8	-0.3
in planta	Plant=no_plant; PlantTreatment=None; Sample=soil; GrowthSubstrate=clay; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days	-0.7	-0.2	-0.2	-0.1	-1.0
plant outgrowth control	Plant outgrowth control	-0.2	+0.3	-0.4	-0.3	-1.3
stress	Growth in presence of pinene	+0.1	+0.1	-0.3	-0.5	-1.4
in planta	Plant=Brachypodium_distachyon; PreTreatment=None; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=R2A_with_kan10; Time=21days	-0.1	+0.3	-0.1	-1.0	-0.8
in planta	Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_liquid; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days	+0.2	-0.0	-0.6	+0.3	-1.5
stress	RCH2_defined_glucose_5mM with Indole-3-pyruvic 1 mM	+0.1	+0.2	+0.2	-1.4	-0.3
in planta	Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_liquid; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days	+0.2	+0.4	+0.0	-0.9	-0.8
stress	RCH2_defined_glucose_5mM with Pyridoxal 1 mM	+0.1	-0.1	-0.2	-1.1	+0.9
carbon source	Adenosine (C)	+0.1	-0.1	+0.0	+1.1	-1.6
soil extract	Sucrose 5 mM in soil extract	-0.1	+0.3	-0.0	-1.0	+0.6
carbon source	m-Inositol (C)	+0.0	+0.1	+0.4	-2.0	+1.2
in planta	Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days	-0.0	-0.2	+0.7	-1.2	+0.5
stress	RCH2_defined_glucose_5mM with Adenine 2 mM	+0.0	-0.3	+0.3	-0.8	+0.7
in planta	Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days	+0.4	+0.1	+0.7	-1.2	+0.2
in planta	Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=liquid_soil_extract; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days	+0.3	+0.6	-0.5	+1.2	-0.6
carbon source	D-Sorbitol (C)	+0.1	-0.2	+0.6	-0.5	+1.2
in planta	Plant=Medicago_truncatula; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sterile_soil; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=19_days	-0.5	+0.0	+1.1	-0.7	+1.3
carbon source	L-Fucose (C)	+0.1	-0.4	+0.4	+0.5	+0.9
carbon source	Tween 20 (C)	+0.0	-0.3	+0.9	-0.1	+1.0
carbon source	D-Glucuronic Acid (C)	-0.1	-0.2	+0.8	+0.4	+0.7
in planta	Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=liquid_soil_extract; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days	+0.2	+0.4	+0.1	+1.3	-0.3
carbon source	D-Gluconic Acid (C)	+0.1	-0.1	+0.8	-0.1	+1.2
carbon source	Tween 20 (C)	-0.2	-0.1	+0.5	+0.2	+1.3
carbon source	D-Mannose (C)	-0.0	-0.3	+0.7	+0.4	+1.1
carbon source	D-Fructose (C)	-0.2	-0.1	+0.8	+0.3	+1.2
carbon source	D-Galactose (C)	+0.1	-0.1	+0.6	+0.6	+0.8
carbon source	D-Glucose-6-Phosphate (C)	-0.0	-0.2	+0.6	+0.5	+1.2
carbon source	L-Histidine (C)	+0.1	-0.3	+0.8	+0.7	+1.3