Fitness for 5 genes in Paraburkholderia graminis OAS925

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500 ntABIE53_003182 and ABIE53_003183 are separated by 7 nucleotidesABIE53_003183 and ABIE53_003184 are separated by 78 nucleotidesABIE53_003184 and ABIE53_003185 are separated by 80 nucleotidesABIE53_003185 and ABIE53_003186 are separated by 162 nucleotides ABIE53_003182: ABIE53_003182 - hypothetical protein, at 3,601,704 to 3,602,390 _003182 ABIE53_003183: ABIE53_003183 - D-galactonate transporter, at 3,602,398 to 3,603,759 _003183 ABIE53_003184: ABIE53_003184 - DNA-binding GntR family transcriptional regulator, at 3,603,838 to 3,604,518 _003184 ABIE53_003185: ABIE53_003185 - aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A, at 3,604,599 to 3,605,978 _003185 ABIE53_003186: ABIE53_003186 - disulfide bond formation protein DsbB, at 3,606,141 to 3,606,650 _003186
Group Condition ABIE53_003182 ABIE53_003183 ABIE53_003184 ABIE53_003185 ABIE53_003186
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sterile_soil; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.4 -0.1 -0.2 -0.2 -4.8
stress RCH2_defined_glucose_5mM with Indole-3-pyruvic 0.5 mM -0.1 -0.0 -0.3 -0.0 -4.7
stress RCH2_defined_glucose_5mM with 2,3-dihydroxybenzoic 5 mM +0.1 +0.0 -0.5 -0.0 -4.7
in planta Plant=no_plant; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.5 -0.1 -0.3 +0.2 -4.3
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sterile_soil; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.5 +0.1 -0.1 -0.1 -4.5
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=root; GrowthSubstrate=sterile_soil; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.4 -0.2 -0.1 +0.0 -4.3
stress RCH2_defined_glucose_5mM with Lumichrome 5 mM -0.2 +0.1 -0.2 -0.0 -4.6
stress RCH2_defined_glucose_5mM with Pyridoxal 0.5 mM +0.0 -0.1 -0.2 +0.0 -4.8
stress RCH2_defined_glucose_5mM with Chlorogenic 0.5 mM -0.3 +0.0 -0.2 -0.2 -4.3
stress RCH2_defined_glucose_5mM with Lumazine 5 mM +0.1 -0.1 -0.0 -0.4 -4.4
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=liquid_soil_extract; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.5 +0.2 -0.2 -0.5 -3.9
stress RCH2_defined_glucose_5mM with Cinnamic 5 mM -0.0 +0.1 -0.4 -0.4 -4.2
stress RCH2_defined_glucose_5mM with caffeic 0.5 mM +0.1 -0.0 -0.5 -0.1 -4.3
in planta Plant=no_plant; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.3 -0.0 -0.3 +0.2 -4.4
stress RCH2_defined_glucose_5mM with Indole-3-pyruvic 1 mM +0.1 +0.2 -0.4 +0.0 -4.7
stress RCH2_defined_glucose_5mM with Ferulic Acid 5 mM +0.1 -0.0 -0.3 -0.1 -4.4
stress RCH2_defined_glucose_5mM with Indole-3-pyruvic 0.5 mM +0.1 -0.1 -0.3 +0.0 -4.6
stress RCH2_defined_glucose_5mM with Chlorogenic 2 mM +0.1 -0.1 -0.3 +0.0 -4.5
stress RCH2_defined_glucose_5mM with 2,3-dihydroxybenzoic 5 mM +0.1 +0.0 -0.2 -0.1 -4.6
in planta Plant=no_plant; PlantTreatment=None; Sample=soil; GrowthSubstrate=liquid_soil_extract; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.0 -0.0 -0.3 +0.1 -4.6
stress RCH2_defined_glucose_5mM with Indole-3-pyruvic 1 mM +0.1 +0.0 -0.4 +0.1 -4.5
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=liquid_soil_extract; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.3 -0.1 -0.0 -0.2 -4.6
stress RCH2_defined_glucose_5mM with Chlorogenic 2 mM +0.2 +0.1 -0.5 -0.3 -4.0
stress control RCH2_defined_glucose_5mM with Dimethyl Sulfoxide 1 vol% +0.4 -0.1 -0.3 -0.1 -4.3
in planta Plant=no_plant; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.1 -0.1 +0.0 +0.3 -4.5
stress RCH2_defined_glucose_5mM with Chlorogenic 1 mM +0.3 +0.1 -0.2 -0.2 -4.5
in planta Plant=no_plant; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_liquid; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.2 +0.1 +0.2 +0.2 -4.7
in planta Plant=no_plant; PlantTreatment=None; Sample=soil; GrowthSubstrate=liquid_soil_extract; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.7 -0.2 -0.2 -0.1 -4.5
stress RCH2_defined_glucose_5mM with Pyridoxal 1 mM +0.6 +0.2 -0.3 -0.1 -4.7
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.5 +0.1 -0.3 -0.0 -4.3
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