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Fitness for 5 genes in
Paraburkholderia graminis OAS925
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
ABIE53_003153 and ABIE53_003154 are separated by 34 nucleotides
ABIE53_003154 and ABIE53_003155 are separated by 33 nucleotides
ABIE53_003155 and ABIE53_003156 are separated by 51 nucleotides
ABIE53_003156 and ABIE53_003157 are separated by 87 nucleotides
ABIE53_003153: ABIE53_003153 - cytidylate kinase, at 3,565,914 to 3,566,597
_003153
ABIE53_003154: ABIE53_003154 - 3-phosphoshikimate 1-carboxyvinyltransferase, at 3,566,632 to 3,567,936
_003154
ABIE53_003155: ABIE53_003155 - prephenate dehydrogenase, at 3,567,970 to 3,568,911
_003155
ABIE53_003156: ABIE53_003156 - histidinol-phosphate aminotransferase, at 3,568,963 to 3,570,075
_003156
ABIE53_003157: ABIE53_003157 - chorismate mutase/prephenate dehydratase, at 3,570,163 to 3,571,245
_003157
Group
Condition
ABIE53
_003153
ABIE53
_003154
ABIE53
_003155
ABIE53
_003156
ABIE53
_003157
stress
M9 with Isopropyl alcohol 21 g/L
N.D.
N.D.
N.D.
-0.1
-7.0
m9 no stress control
M9 no stress control
N.D.
N.D.
N.D.
-0.1
-6.9
m9 no stress control
M9 no stress control
N.D.
N.D.
N.D.
-0.0
-7.0
stress
M9 with 3-methyl-3-butenol 4.5 g/L
N.D.
N.D.
N.D.
+0.1
-7.0
m9 no stress control
M9 no stress control
N.D.
N.D.
N.D.
+0.0
-6.9
stress
M9 with 3-methyl-3-butenol 4.5 g/L
N.D.
N.D.
N.D.
-0.0
-6.8
stress
M9 with Propan-1-ol 13 g/L
N.D.
N.D.
N.D.
+0.0
-6.7
stress
M9 with 3-methyl-3-butenol 4.5 g/L
N.D.
N.D.
N.D.
+0.1
-6.7
stress
M9 with Propan-1-ol 13 g/L
N.D.
N.D.
N.D.
-0.0
-6.6
stress
M9 with Propan-1-ol 13 g/L
N.D.
N.D.
N.D.
+0.0
-6.5
m9 no stress control
M9 no stress control
N.D.
N.D.
N.D.
-0.0
-6.4
stress
M9 with Propan-1-ol 13 g/L
N.D.
N.D.
N.D.
+0.0
-6.3
stress
M9 with Isopropyl alcohol 21 g/L
N.D.
N.D.
N.D.
+0.1
-6.2
stress
M9 with 3-methyl-2-butenol 2 g/L
N.D.
N.D.
N.D.
+0.1
-6.2
stress
M9 with Isopropyl alcohol 21 g/L
N.D.
N.D.
N.D.
-0.1
-5.9
stress
M9 with Ethanol 2.5 vol%
N.D.
N.D.
N.D.
-0.2
-5.8
stress
M9 with Ethanol 2.5 vol%
N.D.
N.D.
N.D.
+0.1
-6.0
stress
M9 with 3-methyl-3-butenol 4.5 g/L
N.D.
N.D.
N.D.
+0.1
-6.0
stress
M9 with PEG 6000 16 vol%
N.D.
N.D.
N.D.
+0.1
-6.0
stress
M9 with PEG 6000 16 vol%
N.D.
N.D.
N.D.
-0.0
-5.7
stress
M9 with Ethanol 2.5 vol%
N.D.
N.D.
N.D.
+0.1
-5.8
stress
M9 with Isopropyl alcohol 21 g/L
N.D.
N.D.
N.D.
-0.1
-5.6
stress
M9 with 3-methyl-2-butenol 2 g/L
N.D.
N.D.
N.D.
-0.2
-5.4
stress
M9 with PEG 6000 16 vol%
N.D.
N.D.
N.D.
+0.1
-5.5
stress
M9 with Chloride 200 mM
N.D.
N.D.
N.D.
-0.1
-5.2
stress
M9 with PEG 6000 16 vol%
N.D.
N.D.
N.D.
+0.0
-5.3
stress
M9 with Ethanol 2.5 vol%
N.D.
N.D.
N.D.
+0.0
-5.2
carbon source
Shikimic Acid 5 mM (C)
N.D.
N.D.
N.D.
+0.0
-5.1
stress
M9 with 3-methyl-2-butenol 2 g/L
N.D.
N.D.
N.D.
-0.1
-4.9
carbon source
Shikimic Acid 5 mM (C)
N.D.
N.D.
N.D.
+0.3
-4.9
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