Fitness for 5 genes in Paraburkholderia graminis OAS925

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500 ntABIE53_003098 and ABIE53_003099 are separated by 8 nucleotidesABIE53_003099 and ABIE53_003100 are separated by 333 nucleotidesABIE53_003100 and ABIE53_003101 are separated by 35 nucleotidesABIE53_003101 and ABIE53_003102 are separated by 430 nucleotides ABIE53_003098: ABIE53_003098 - three-Cys-motif partner protein, at 3,499,779 to 3,501,053 _003098 ABIE53_003099: ABIE53_003099 - protein gp37, at 3,501,062 to 3,501,811 _003099 ABIE53_003100: ABIE53_003100 - three-Cys-motif partner protein, at 3,502,145 to 3,503,344 _003100 ABIE53_003101: ABIE53_003101 - deoxycytidylate deaminase/dephospho-CoA kinase, at 3,503,380 to 3,505,140 _003101 ABIE53_003102: ABIE53_003102 - cardiolipin synthase, at 3,505,571 to 3,506,383 _003102
Group Condition ABIE53_003098 ABIE53_003099 ABIE53_003100 ABIE53_003101 ABIE53_003102
plant outgrowth control Plant outgrowth control -0.9 N.D. -0.6 -1.3 -0.8
carbon source Shikimic Acid 5 mM (C) -1.1 N.D. -0.5 -1.2 -0.6
carbon source Shikimic Acid 5 mM (C) -1.1 N.D. -0.6 -1.1 -0.2
plant outgrowth control Plant outgrowth control -0.6 N.D. -0.4 -1.1 -0.7
stress R2A with Tricalcium phosphate 0.5 g/L -0.7 N.D. -0.5 -1.1 -0.4
plant outgrowth control Plant outgrowth control -0.5 N.D. -0.4 -1.3 -0.4
stress R2A with Tricalcium phosphate 0.5 g/L -0.6 N.D. -0.4 -1.1 -0.3
plant outgrowth control Plant outgrowth control -0.7 N.D. -0.4 -0.8 -0.3
carbon source Laminarin 10 g/L (C) -0.8 N.D. -0.2 -1.0 -0.3
plant outgrowth control Plant outgrowth control -0.5 N.D. -0.4 -1.1 -0.3
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=root; GrowthSubstrate=sterile_soil; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.5 N.D. -0.3 -0.8 -0.6
carbon source Laminarin 10 g/L (C) -0.5 N.D. -0.5 -0.8 -0.4
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.4 N.D. -0.1 -1.2 -0.4
in planta Plant=no_plant; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.4 N.D. -0.3 -0.8 -0.4
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_liquid; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.9 N.D. +0.2 -0.6 -0.3
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_liquid; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.6 N.D. +0.6 -0.3 -0.4
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_liquid; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.8 N.D. +0.7 -0.2 -0.1
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_liquid; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +1.4 N.D. +0.4 -0.4 -0.1
in planta Plant=no_plant; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_liquid; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.8 N.D. +0.8 +0.4 -0.5
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_liquid; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +1.2 N.D. +0.6 -0.1 -0.2
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_liquid; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +1.2 N.D. +0.8 +0.1 -0.4
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.9 N.D. +0.8 +0.5 +0.0
stress M9 with 3-methyl-2-butenol 2 g/L +0.6 N.D. +0.4 +0.9 +0.4
stress M9 with 3-methyl-2-butenol 2 g/L +0.5 N.D. +0.5 +1.0 +0.3
stress M9 with 3-methyl-2-butenol 2 g/L +0.6 N.D. +0.5 +0.9 +0.3
stress M9 with 3-methyl-2-butenol 2 g/L +0.5 N.D. +0.5 +0.9 +0.4
in planta Plant=switchgrass; PreTreatment=None; PlantTreatment=low_phosphate; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=R2A_with_kan10; Time=21days +0.9 N.D. +0.6 +1.0 -0.2
in planta Plant=no_plant; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_liquid; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +1.3 N.D. +1.3 +0.9 -0.4
in planta Plant=Brachypodium_distachyon; PreTreatment=None; PlantTreatment=low_phosphate; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=R2A_with_kan10; Time=21days +1.7 N.D. +1.2 +1.3 +0.4
in planta Plant=Brachypodium_distachyon; PreTreatment=None; PlantTreatment=low_phosphate; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=R2A_with_kan10; Time=21days +2.0 N.D. +1.4 +2.2 +0.3
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