Fitness for 5 genes in Paraburkholderia graminis OAS925

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500 ntABIE53_003096 and ABIE53_003097 overlap by 8 nucleotidesABIE53_003097 and ABIE53_003098 are separated by 684 nucleotidesABIE53_003098 and ABIE53_003099 are separated by 8 nucleotidesABIE53_003099 and ABIE53_003100 are separated by 333 nucleotides ABIE53_003096: ABIE53_003096 - hypothetical protein, at 3,495,764 to 3,497,878 _003096 ABIE53_003097: ABIE53_003097 - integrase/recombinase XerD, at 3,497,871 to 3,499,094 _003097 ABIE53_003098: ABIE53_003098 - three-Cys-motif partner protein, at 3,499,779 to 3,501,053 _003098 ABIE53_003099: ABIE53_003099 - protein gp37, at 3,501,062 to 3,501,811 _003099 ABIE53_003100: ABIE53_003100 - three-Cys-motif partner protein, at 3,502,145 to 3,503,344 _003100
Group Condition ABIE53_003096 ABIE53_003097 ABIE53_003098 ABIE53_003099 ABIE53_003100
plant outgrowth control Plant outgrowth control -0.8 -1.0 -0.9 N.D. -0.6
carbon source Shikimic Acid 5 mM (C) -0.7 -0.9 -1.1 N.D. -0.6
carbon source Shikimic Acid 5 mM (C) -0.6 -0.9 -1.1 N.D. -0.5
stress R2A with Tricalcium phosphate 0.5 g/L -0.5 -1.0 -0.7 N.D. -0.5
plant outgrowth control Plant outgrowth control -0.6 -0.9 -0.6 N.D. -0.4
stress R2A with Tricalcium phosphate 0.5 g/L -0.5 -0.9 -0.6 N.D. -0.4
plant outgrowth control Plant outgrowth control -0.6 -0.9 -0.5 N.D. -0.4
plant outgrowth control Plant outgrowth control -0.5 -0.6 -0.7 N.D. -0.4
carbon source Laminarin 10 g/L (C) -0.4 -0.8 -0.5 N.D. -0.5
carbon source Laminarin 10 g/L (C) -0.4 -0.7 -0.8 N.D. -0.2
plant outgrowth control Plant outgrowth control -0.3 -0.6 -0.5 N.D. -0.4
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sterile_soil; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.4 -0.7 -0.3 N.D. -0.4
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.4 -0.8 -0.4 N.D. -0.1
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_liquid; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.7 -1.0 +0.9 N.D. +0.2
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_liquid; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.3 -0.6 +0.6 N.D. +0.6
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_liquid; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.5 -0.8 +1.4 N.D. +0.4
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_liquid; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.2 -0.4 +0.8 N.D. +0.7
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_liquid; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.4 -0.2 +1.2 N.D. +0.8
in planta Plant=no_plant; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_liquid; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.1 -0.1 +0.8 N.D. +0.8
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_liquid; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.0 -0.1 +1.2 N.D. +0.6
in planta Plant=Brachypodium_distachyon; PreTreatment=None; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=R2A_with_kan10; Time=21days +0.0 +0.3 +0.9 N.D. +0.6
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.2 -0.0 +0.9 N.D. +0.8
in planta Plant=switchgrass; PreTreatment=None; PlantTreatment=low_phosphate; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=R2A_with_kan10; Time=21days +0.3 +0.3 +0.9 N.D. +0.6
stress M9 with 3-methyl-2-butenol 2 g/L +0.5 +0.9 +0.6 N.D. +0.4
in planta Plant=no_plant; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_liquid; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.2 -0.0 +1.3 N.D. +1.3
stress M9 with 3-methyl-2-butenol 2 g/L +0.6 +0.8 +0.5 N.D. +0.5
stress M9 with 3-methyl-2-butenol 2 g/L +0.6 +1.0 +0.5 N.D. +0.5
stress M9 with 3-methyl-2-butenol 2 g/L +0.6 +1.0 +0.6 N.D. +0.5
in planta Plant=Brachypodium_distachyon; PreTreatment=None; PlantTreatment=low_phosphate; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=R2A_with_kan10; Time=21days +0.1 +0.3 +1.7 N.D. +1.2
in planta Plant=Brachypodium_distachyon; PreTreatment=None; PlantTreatment=low_phosphate; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=R2A_with_kan10; Time=21days +0.5 +0.4 +2.0 N.D. +1.4
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