Fitness for 5 genes in Paraburkholderia graminis OAS925

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500 ntABIE53_003093 and ABIE53_003094 are separated by 12 nucleotidesABIE53_003094 and ABIE53_003095 overlap by 8 nucleotidesABIE53_003095 and ABIE53_003096 are separated by 729 nucleotidesABIE53_003096 and ABIE53_003097 overlap by 8 nucleotides ABIE53_003093: ABIE53_003093 - thymidylate synthase, at 3,492,586 to 3,493,419 _003093 ABIE53_003094: ABIE53_003094 - hypothetical protein, at 3,493,432 to 3,493,881 _003094 ABIE53_003095: ABIE53_003095 - hypothetical protein, at 3,493,874 to 3,495,034 _003095 ABIE53_003096: ABIE53_003096 - hypothetical protein, at 3,495,764 to 3,497,878 _003096 ABIE53_003097: ABIE53_003097 - integrase/recombinase XerD, at 3,497,871 to 3,499,094 _003097
Group Condition ABIE53_003093 ABIE53_003094 ABIE53_003095 ABIE53_003096 ABIE53_003097
plant outgrowth control Plant outgrowth control N.D. -0.4 -0.6 -0.8 -1.0
carbon source Shikimic Acid 5 mM (C) N.D. -0.2 -0.9 -0.7 -0.9
carbon source Shikimic Acid 5 mM (C) N.D. -0.1 -0.7 -0.6 -0.9
plant outgrowth control Plant outgrowth control N.D. -0.1 -0.7 -0.6 -0.9
stress R2A with Tricalcium phosphate 0.5 g/L N.D. -0.2 -0.7 -0.5 -0.9
plant outgrowth control Plant outgrowth control N.D. -0.1 -0.5 -0.6 -0.9
plant outgrowth control Plant outgrowth control N.D. -0.4 -0.6 -0.3 -0.6
plant outgrowth control Plant outgrowth control N.D. -0.2 -0.6 -0.5 -0.6
carbon source Laminarin 10 g/L (C) N.D. -0.2 -0.5 -0.4 -0.7
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_liquid; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days N.D. -0.1 -0.0 -0.7 -1.0
carbon source Laminarin 10 g/L (C) N.D. +0.1 -0.6 -0.4 -0.8
stress R2A with Tricalcium phosphate 0.5 g/L N.D. +0.1 -0.4 -0.5 -1.0
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days N.D. +0.1 -0.6 -0.4 -0.8
in planta Plant=no_plant; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days N.D. -0.1 -0.5 -0.4 -0.5
r2a outgrowth control R2A outgrowth control N.D. -0.1 -0.6 -0.2 -0.5
carbon source homovanillyl alcohol and Ethanols N.D. -0.1 -0.6 -0.2 -0.6
carbon source Ferulic Acid and Ethanols N.D. -0.1 -0.5 -0.3 -0.6
carbon source homovanillyl alcohol and Ethanols N.D. -0.2 -0.5 -0.2 -0.5
carbon source Epiandrosterone and Ethanols N.D. -0.1 -0.4 -0.3 -0.6
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sterile_soil; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days N.D. +0.3 -0.4 -0.4 -0.7
in planta Plant=no_plant; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_liquid; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days N.D. +0.2 -0.4 -0.2 -0.8
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_liquid; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days N.D. -0.2 +0.3 -0.5 -0.8
carbon source Acetylated xylan 10 g/L (C) N.D. +0.2 -0.6 -0.3 -0.3
m9 no stress control M9 no stress control N.D. -0.0 +0.6 +0.3 +0.6
m9 no stress control M9 no stress control N.D. -0.1 +0.6 +0.5 +0.6
m9 no stress control M9 no stress control N.D. +0.0 +0.5 +0.4 +0.7
stress M9 with 3-methyl-2-butenol 2 g/L N.D. +0.2 +0.5 +0.6 +1.0
stress M9 with 3-methyl-2-butenol 2 g/L N.D. +0.0 +0.7 +0.6 +1.0
stress M9 with 3-methyl-2-butenol 2 g/L N.D. +0.3 +0.7 +0.6 +0.8
stress M9 with 3-methyl-2-butenol 2 g/L N.D. +0.3 +0.8 +0.5 +0.9
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ABIE53_003093
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ABIE53_003094
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ABIE53_003097
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