Fitness for 5 genes in Paraburkholderia graminis OAS925

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	ABIE53_003053	ABIE53_003054	ABIE53_003055	ABIE53_003056	ABIE53_003057
stress	RCH2_defined_glucose_5mM with Adenine 5 mM	-0.8	-0.2	-0.1	-0.6	-0.8
stress	RCH2_defined_glucose_5mM with Adenine 5 mM	-0.7	-0.3	-0.1	-0.3	-0.5
in planta	Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=clay; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days	-0.4	-0.4	-0.0	-0.6	-0.0
in planta	Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=clay; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days	-0.3	-0.2	-0.1	-0.6	+0.1
in planta	Plant=switchgrass; PreTreatment=None; PlantTreatment=low_phosphate; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=R2A_with_kan10; Time=21days	-1.3	+0.6	-0.4	+0.2	-0.2
plant outgrowth control	Plant outgrowth control	-0.3	-0.6	-0.1	-0.3	+0.1
carbon source	Acetylated xylan 10 g/L (C)	-0.5	-0.8	-0.1	-0.1	+0.5
motility_chemotaxis	Motility_chemotaxis, R2A; outer cut	+0.3	-0.5	-0.2	-0.3	-0.3
carbon source	Acetylated xylan 10 g/L (C)	-0.1	-1.0	-0.3	-0.0	+0.6
in planta	Plant=Brachypodium_distachyon; PreTreatment=None; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=R2A_with_kan10; Time=21days	-0.5	-0.1	-0.4	-0.1	+0.3
in planta	Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_liquid; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days	-0.4	-0.2	-0.2	-0.4	+0.6
in planta	Plant=Brachypodium_distachyon; PreTreatment=None; PlantTreatment=low_phosphate; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=R2A_with_kan10; Time=21days	-0.7	-0.2	-0.1	-0.2	+0.5
carbon source	Cinnamic and Ethanols	-0.1	-0.5	-0.4	+0.2	+0.2
in planta	Plant=Arabidopsis_thaliana; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days	+0.3	-0.5	+0.2	-0.4	-0.1
in planta	Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days	+0.3	-0.2	-0.4	-0.4	+0.1
motility_chemotaxis	Motility_chemotaxis, R2A; outer cut	+0.7	-0.4	-0.3	-0.1	-0.2
stress	RCH2_defined_glucose_5mM with caffeic 1 mM	-0.2	-0.4	-0.3	-0.0	+0.6
in planta	Plant=switchgrass; PreTreatment=None; PlantTreatment=low_phosphate; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=R2A_with_kan10; Time=21days	-0.3	+0.5	-0.6	+0.1	+0.0
soil extract	Indole-3-pyruvic 5 mM in soil extract	-0.1	-0.5	-0.2	-0.2	+0.8
carbon source	D-Fructose (C)	-0.4	-0.0	+0.3	-0.3	+0.4
carbon source	D-Glucuronic Acid (C)	-0.6	+0.3	+0.2	-0.0	+0.3
stress	R2A with (5z)-4-bromo-5-(bromomethylene)-2(5h)-furanone 10 uM	+0.6	-0.1	+0.2	-0.3	-0.1
soil extract	Indole-3-pyruvic 5 mM in soil extract	-0.1	-0.2	-0.2	-0.1	+0.9
in planta	Plant=switchgrass; PreTreatment=None; PlantTreatment=low_phosphate; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=R2A_with_kan10; Time=21days	+0.2	+0.2	-0.3	-0.3	+0.6
in planta	Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_liquid; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days	+0.4	-0.2	-0.0	-0.3	+0.6
stress	R2A with Quartz_sand 500 g/L	+0.7	-0.1	+0.3	-0.3	+0.1
in planta	Plant=no_plant; PlantTreatment=None; Sample=soil; GrowthSubstrate=liquid_soil_extract; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days	-0.3	+0.4	+0.2	-0.2	+0.4
plant outgrowth control	Plant outgrowth control	+0.5	+0.2	+0.2	-0.3	+0.2
in planta	Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=liquid_soil_extract; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days	-0.2	-0.3	+0.1	+0.2	+1.2
in planta	Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=liquid_soil_extract; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days	+0.6	+0.5	+0.2	+0.1	+0.2