Fitness for 5 genes in Paraburkholderia graminis OAS925

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500 ntABIE53_002976 and ABIE53_002977 overlap by 115 nucleotidesABIE53_002977 and ABIE53_002978 are separated by 26 nucleotidesABIE53_002978 and ABIE53_002979 are separated by 620 nucleotidesABIE53_002979 and ABIE53_002980 overlap by 4 nucleotides ABIE53_002976: ABIE53_002976 - hypothetical protein, at 3,370,047 to 3,370,373 _002976 ABIE53_002977: ABIE53_002977 - hypothetical protein, at 3,370,259 to 3,370,519 _002977 ABIE53_002978: ABIE53_002978 - hypothetical protein, at 3,370,546 to 3,370,731 _002978 ABIE53_002979: ABIE53_002979 - hypothetical protein, at 3,371,352 to 3,371,660 _002979 ABIE53_002980: ABIE53_002980 - MATE family multidrug resistance protein, at 3,371,657 to 3,373,393 _002980
Group Condition ABIE53_002976 ABIE53_002977 ABIE53_002978 ABIE53_002979 ABIE53_002980
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_liquid; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.5 N.D. N.D. -1.3 -0.3
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_liquid; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.4 N.D. N.D. -1.4 -0.3
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=root; GrowthSubstrate=sterile_soil; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.5 N.D. N.D. -0.9 -0.3
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_liquid; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.7 N.D. N.D. -0.6 -0.3
carbon source Acetylated xylan 10 g/L (C) -0.9 N.D. N.D. -0.4 -0.2
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=root; GrowthSubstrate=liquid_soil_extract; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=19_days -0.2 N.D. N.D. -1.2 -0.1
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_liquid; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.7 N.D. N.D. -0.5 -0.3
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_liquid; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.5 N.D. N.D. -0.9 +0.1
in planta Plant=Arabidopsis_thaliana; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.4 N.D. N.D. -0.8 -0.2
in planta Plant=switchgrass; PreTreatment=None; PlantTreatment=low_phosphate; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=R2A_with_kan10; Time=21days -0.3 N.D. N.D. -0.7 -0.5
stress RCH2_defined_glucose_5mM with Adenine 4 mM -0.0 N.D. N.D. -1.1 -0.3
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.3 N.D. N.D. -0.8 -0.2
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=clay; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.2 N.D. N.D. -0.9 -0.2
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=root; GrowthSubstrate=liquid_soil_extract; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=19_days -0.1 N.D. N.D. -1.2 -0.1
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_liquid; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.0 N.D. N.D. -1.2 -0.1
in planta Plant=Brachypodium_distachyon; PreTreatment=None; PlantTreatment=low_phosphate; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=R2A_with_kan10; Time=21days -0.3 N.D. N.D. -0.5 -0.4
in planta Plant=Brachypodium_distachyon; PreTreatment=None; PlantTreatment=low_phosphate; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=R2A_with_kan10; Time=21days -0.3 N.D. N.D. -0.6 -0.2
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=root; GrowthSubstrate=sterile_soil; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=19_days -0.4 N.D. N.D. -1.0 +0.2
in planta Plant=no_plant; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.4 N.D. N.D. -0.5 -0.3
carbon source 2,3-dihydroxybenzoic and Ethanols -0.4 N.D. N.D. -0.6 -0.1
r2a no shaking R2A no shaking -0.1 N.D. N.D. -0.9 -0.0
stress RCH2_defined_glucose_5mM with Adenine 4 mM -0.1 N.D. N.D. -0.7 -0.2
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=19_days +0.1 N.D. N.D. -0.6 -0.3
carbon source Cinnamic and Ethanols -0.5 N.D. N.D. -0.4 +0.1
carbon source D,L-Malic Acid (C) +0.3 N.D. N.D. -1.0 -0.1
carbon source L-Threonine (C) +0.1 N.D. N.D. -0.8 +0.2
carbon source L-Proline (C) +0.3 N.D. N.D. -0.7 +0.1
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.3 N.D. N.D. +0.6 +0.3
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.1 N.D. N.D. +0.8 +0.2
stress M9 with 3-methyl-2-butenol 2 g/L +0.4 N.D. N.D. +0.7 +0.0
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ABIE53_002976
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ABIE53_002977
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ABIE53_002979
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ABIE53_002980
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