Fitness for 5 genes in Paraburkholderia graminis OAS925

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 488 experiments or choose conditions or try the comparative fitness browser

500 ntABIE53_002974 and ABIE53_002975 are separated by 175 nucleotidesABIE53_002975 and ABIE53_002976 are separated by 108 nucleotidesABIE53_002976 and ABIE53_002977 overlap by 115 nucleotidesABIE53_002977 and ABIE53_002978 are separated by 26 nucleotides ABIE53_002974: ABIE53_002974 - galactose mutarotase-like enzyme, at 3,368,132 to 3,369,040 _002974 ABIE53_002975: ABIE53_002975 - lipoprotein YgeR, at 3,369,216 to 3,369,938 _002975 ABIE53_002976: ABIE53_002976 - hypothetical protein, at 3,370,047 to 3,370,373 _002976 ABIE53_002977: ABIE53_002977 - hypothetical protein, at 3,370,259 to 3,370,519 _002977 ABIE53_002978: ABIE53_002978 - hypothetical protein, at 3,370,546 to 3,370,731 _002978
Group Condition ABIE53_002974 ABIE53_002975 ABIE53_002976 ABIE53_002977 ABIE53_002978
carbon source D-Galacturonic Acid (C) -1.2 -1.4 +0.1 N.D. N.D.
carbon source Glucuronamide (C) -2.2 -0.2 +0.0 N.D. N.D.
carbon source Glucuronamide (C) -2.0 -0.2 +0.0 N.D. N.D.
carbon source Tween 20 (C) -0.2 -1.8 +0.0 N.D. N.D.
carbon source D-Sorbitol (C) -1.0 -0.6 -0.0 N.D. N.D.
carbon source D-Galacturonic Acid (C) -1.4 -0.3 +0.1 N.D. N.D.
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_liquid; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.0 -0.9 -0.5 N.D. N.D.
stress M9 with Chloride 200 mM -0.3 -0.9 -0.2 N.D. N.D.
carbon source D-Lactate (C) -0.4 -1.1 +0.0 N.D. N.D.
carbon source D-Sorbitol (C) -0.7 -0.9 +0.1 N.D. N.D.
carbon source L-Lactate (C) -0.4 -1.0 +0.0 N.D. N.D.
stress RCH2_defined_glucose_5mM with homovanillyl alcohol 5 mM +0.1 -1.4 +0.1 N.D. N.D.
carbon source Glycerol (C) -0.3 -1.0 +0.1 N.D. N.D.
carbon source D-Glucose-6-Phosphate (C) +0.1 -1.4 +0.2 N.D. N.D.
carbon source D-Ribose (C) -0.1 -1.2 +0.1 N.D. N.D.
carbon source D,L-Malic Acid (C) +0.2 -1.4 +0.1 N.D. N.D.
carbon source Adenosine (C) -0.3 -0.9 +0.2 N.D. N.D.
in planta Plant=Brachypodium_distachyon; PreTreatment=None; PlantTreatment=low_phosphate; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=R2A_with_kan10; Time=21days +0.5 -1.2 -0.3 N.D. N.D.
in planta Plant=Brachypodium_distachyon; PreTreatment=None; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=R2A_with_kan10; Time=21days -0.6 +0.3 -0.6 N.D. N.D.
carbon source D-Glucose (C) +0.2 -1.1 +0.1 N.D. N.D.
carbon source D-Gluconic Acid (C) -0.1 -1.0 +0.4 N.D. N.D.
carbon source Acetylated xylan 10 g/L (C) -0.2 +0.6 -0.9 N.D. N.D.
in planta Plant=Arabidopsis_thaliana; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.6 +0.5 -0.4 N.D. N.D.
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_liquid; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.3 +0.5 -0.7 N.D. N.D.
carbon source D-Gluconic Acid (C) +0.2 -1.1 +0.5 N.D. N.D.
plant outgrowth control Plant outgrowth control +0.2 +0.6 -0.7 N.D. N.D.
in planta Plant=no_plant; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.3 +0.9 -0.2 N.D. N.D.
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=19_days +0.6 +0.5 -0.3 N.D. N.D.
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=liquid_soil_extract; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.3 +0.9 -0.3 N.D. N.D.
in planta Plant=no_plant; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.3 +1.0 +0.1 N.D. N.D.
remove
ABIE53_002974
plot		 remove
ABIE53_002975
plot		 remove
ABIE53_002976		 remove
ABIE53_002977
plot		 remove
ABIE53_002978
plot