Fitness for 5 genes in Paraburkholderia graminis OAS925

Top 30 experiments (either direction), sorted by average fitness

Or view all 488 experiments or choose conditions or try the comparative fitness browser

Group	Condition	ABIE53_002955	ABIE53_002956	ABIE53_002957	ABIE53_002958	ABIE53_002959
carbon source	L-Phenylalanine (C)	-0.8	-1.1	-1.2	-0.5	-0.4
stress	RCH2_defined_glucose_5mM with Lumazine 5 mM	-1.6	-1.0	-1.4	-0.9	+1.3
stress	R2A with p-Coumaric 0.5 mM	-1.0	-0.8	-0.8	-0.4	-0.3
stress	RCH2_defined_glucose_5mM with Lumazine 5 mM	-1.3	-1.2	-1.0	-1.0	+1.5
motility_chemotaxis	Motility_chemotaxis, R2A; outer cut	-0.3	-1.0	-0.7	-0.3	-0.6
carbon source	L-Phenylalanine (C)	-0.7	-0.9	-0.8	-0.6	+0.2
in planta	Plant=no_plant; PlantTreatment=None; Sample=soil; GrowthSubstrate=liquid_soil_extract; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days	-0.7	-0.4	-0.4	-0.6	+1.1
stress	RCH2_defined_glucose_5mM with Adenine 5 mM	-0.8	-0.9	-0.3	-0.0	+1.0
in planta	Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_liquid; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days	-0.7	-0.8	+0.0	-0.5	+1.0
carbon source	4-Hydroxybenzoic Acid (C)	-0.6	-0.6	-0.5	-0.4	+1.4
in planta	Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=liquid_soil_extract; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days	-0.6	-1.1	-0.1	-0.5	+1.7
in planta	Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=root; GrowthSubstrate=sterile_soil; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=19_days	-0.7	-0.5	-0.6	+0.3	+1.0
carbon source	2-Deoxy-D-Ribose (C)	-0.5	-0.3	-0.7	-0.5	+1.7
soil extract	Indole-3-pyruvic 5 mM in soil extract	-0.8	-0.4	-0.4	-0.2	+1.4
carbon source	D-Cellobiose (C)	+0.1	-0.9	-0.6	-0.2	+1.3
in planta	Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days	-0.9	+0.1	-0.4	-0.5	+1.8
in planta	Plant=switchgrass; PreTreatment=None; PlantTreatment=low_phosphate; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=R2A_with_kan10; Time=21days	-0.8	-0.5	-0.6	-0.2	+2.3
carbon source	2-Deoxy-D-Ribose (C)	-0.3	-0.3	-0.4	-0.5	+1.8
in planta	Plant=switchgrass; PreTreatment=None; PlantTreatment=low_phosphate; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=R2A_with_kan10; Time=21days	-0.9	-0.2	-0.2	+0.1	+1.7
in planta	Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=19_days	-0.7	+0.4	-0.4	-0.4	+1.7
in planta	Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_liquid; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days	+0.1	-0.1	-1.0	-1.0	+2.7
in planta	Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=root; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=19_days	-0.2	-0.5	-0.6	-0.3	+2.4
in planta	Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_liquid; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days	-0.8	+0.3	-0.3	+0.1	+1.8
in planta	Plant=Brachypodium_distachyon; PreTreatment=None; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=R2A_with_kan10; Time=21days	+0.6	-0.5	+0.2	-0.7	+1.5
in planta	Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_liquid; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days	-0.4	-0.1	-0.7	-0.2	+2.6
in planta	Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=liquid_soil_extract; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days	-0.5	+0.1	-0.3	-0.1	+2.1
in planta	Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=19_days	-0.3	-0.4	-0.5	-0.3	+3.4
in planta	Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days	-0.9	+0.3	-0.1	-0.1	+2.7
soil extract	2,3-dihydroxybenzoic 5 mM in soil extract	-0.5	-0.7	+0.1	+0.1	+3.2
soil extract	2,3-dihydroxybenzoic 5 mM in soil extract	-0.3	-0.2	-0.0	+0.1	+3.1