Fitness for 5 genes in Paraburkholderia graminis OAS925

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	ABIE53_002849	ABIE53_002850	ABIE53_002851	ABIE53_002852	ABIE53_002853
in planta	Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days	-0.1	-0.2	-0.5	N.D.	-0.5
in planta	Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=19_days	+0.0	-0.3	-0.4	N.D.	-0.6
stress	RCH2_defined_glucose_5mM with Sucrose 5 mM	+0.1	-0.3	-0.6	N.D.	-0.4
carbon source	Shikimic Acid 5 mM (C)	-0.5	+0.2	-0.2	N.D.	-0.8
stress	M9 with Chloride 200 mM	+0.0	-0.2	-0.5	N.D.	-0.6
stress	RCH2_defined_glucose_5mM with Adenine 5 mM	-0.6	+0.2	-0.0	N.D.	-0.4
stress	RCH2_defined_glucose_5mM with caffeic 1 mM	-0.1	-0.3	-0.4	N.D.	+0.2
carbon source	Glucuronamide (C)	+0.2	+0.2	-0.4	N.D.	-0.6
in planta	Plant=Brachypodium_distachyon; PreTreatment=None; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=R2A_with_kan10; Time=21days	+0.4	-0.1	-0.4	N.D.	-0.5
in planta	Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days	+0.4	-0.3	-0.6	N.D.	-0.0
in planta	Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=19_days	+0.5	+0.3	-0.8	N.D.	-0.4
carbon source	Acetylated xylan 10 g/L (C)	-0.1	+0.3	-0.2	N.D.	-0.4
carbon source	Laminarin 10 g/L (C)	-0.4	+0.1	+0.3	N.D.	-0.5
in planta	Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=liquid_soil_extract; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=19_days	-0.1	+0.2	+0.4	N.D.	-0.7
carbon source	Cinnamic and Ethanols	-0.2	+0.2	-0.6	N.D.	+0.4
carbon source	homovanillyl alcohol and Ethanols	-0.1	+0.2	-0.5	N.D.	+0.3
in planta	Plant=no_plant; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_liquid; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days	+0.4	+0.1	+0.1	N.D.	-0.7
carbon source	D-Fructose (C)	+0.2	+0.3	-0.1	N.D.	-0.5
carbon source	D-Glucose (C)	+0.2	+0.3	-0.3	N.D.	-0.4
in planta	Plant=Medicago_truncatula; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sterile_soil; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=19_days	+0.4	+0.4	-0.1	N.D.	-0.7
in planta	Plant=no_plant; PlantTreatment=None; Sample=soil; GrowthSubstrate=liquid_soil_extract; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days	+0.2	-0.1	+0.6	N.D.	-0.6
in planta	Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=liquid_soil_extract; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days	-0.1	-0.3	+0.7	N.D.	-0.1
carbon source	Salicylic and Ethanols	-0.4	+0.0	-0.1	N.D.	+0.8
motility_chemotaxis	Motility_chemotaxis, R2A; outer cut	-0.1	-0.1	+0.5	N.D.	+0.4
in planta	Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_liquid; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days	+0.3	+0.3	-0.2	N.D.	+0.4
carbon source	D,L-Malic Acid (C)	+0.5	+0.4	+0.1	N.D.	-0.1
in planta	Plant=no_plant; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days	+0.4	-0.2	+0.2	N.D.	+0.5
carbon source	D-Lactate (C)	-0.1	+0.3	+0.5	N.D.	+0.2
in planta	Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days	+0.7	+0.4	-0.2	N.D.	+0.2
in planta	Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=clay; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days	-0.6	+0.2	+0.4	N.D.	+1.1