Fitness for 5 genes in Paraburkholderia graminis OAS925

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	ABIE53_002806	ABIE53_002807	ABIE53_002808	ABIE53_002809	ABIE53_002810
in planta	Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=liquid_soil_extract; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days	N.D.	-0.1	-0.4	+0.2	-2.7
in planta	Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sterile_soil; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days	N.D.	-0.5	-0.5	-0.3	-1.4
in planta	Plant=switchgrass; PreTreatment=None; PlantTreatment=low_phosphate; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=R2A_with_kan10; Time=21days	N.D.	-0.5	-0.1	+0.1	-2.0
carbon source	4-Hydroxybenzoic Acid (C)	N.D.	-1.0	-0.3	-0.5	-0.5
carbon source	Acetylated xylan 10 g/L (C)	N.D.	-0.7	-0.3	-0.3	-0.7
in planta	Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=root; GrowthSubstrate=sterile_soil; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days	N.D.	-0.5	-0.6	+0.0	-0.8
carbon source	4-Hydroxybenzoic Acid (C)	N.D.	-0.8	-0.2	-0.2	-0.6
in planta	Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=19_days	N.D.	-0.5	-0.0	-0.1	-1.2
carbon source	Acetylated xylan 10 g/L (C)	N.D.	-1.2	+0.0	+0.2	-0.6
carbon source	Shikimic Acid 5 mM (C)	N.D.	-0.8	+0.1	-0.3	-0.6
in planta	Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=19_days	N.D.	-0.5	-0.1	+0.0	-0.9
in planta	Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=19_days	N.D.	-0.3	+0.3	-0.3	-0.8
stress	RCH2_defined_glucose_5mM with Cinnamic 5 mM	N.D.	-0.4	+0.2	-0.5	-0.5
carbon source	D,L-Malic Acid (C)	N.D.	-0.9	-0.2	-0.2	+0.4
in planta	Plant=no_plant; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_liquid; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days	N.D.	+0.4	-0.2	+0.2	-0.7
in planta	Plant=no_plant; PlantTreatment=None; Sample=soil; GrowthSubstrate=clay; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days	N.D.	+0.1	+0.5	+0.1	-0.8
carbon source	D,L-Malic Acid (C)	N.D.	-0.8	-0.2	+0.0	+0.8
carbon source	D-Fructose (C)	N.D.	-0.8	-0.2	+0.5	+0.5
stress	RCH2_defined_glucose_5mM with caffeic 1 mM	N.D.	-0.5	+0.1	-0.4	+1.1
stress	RCH2_defined_glucose_5mM with caffeic 0.5 mM	N.D.	-0.3	+0.2	-0.2	+0.8
carbon source	m-Inositol (C)	N.D.	-0.4	-0.3	+0.4	+0.9
carbon source	m-Inositol (C)	N.D.	+0.1	-0.5	+0.1	+0.9
carbon source	D-Gluconic Acid (C)	N.D.	+0.0	-0.3	+0.4	+0.7
stress	RCH2_defined_glucose_5mM with caffeic 0.5 mM	N.D.	-0.3	+0.1	+0.1	+0.9
carbon source	Xylitol (C)	N.D.	-0.6	-0.1	+0.2	+1.4
carbon source	D-Glucosamine Hydrochloride (C)	N.D.	-0.2	+0.3	+0.5	+0.5
stress	M9 with 3-methyl-2-butenol 2 g/L	N.D.	-0.1	+0.1	-0.1	+1.5
stress	M9 with 3-methyl-2-butenol 2 g/L	N.D.	-0.4	+0.2	+0.1	+1.5
stress	M9 with 3-methyl-2-butenol 2 g/L	N.D.	+0.1	+0.1	+0.1	+1.6
stress	M9 with 3-methyl-2-butenol 2 g/L	N.D.	+0.2	-0.1	+0.1	+1.7