Fitness for 5 genes in Paraburkholderia graminis OAS925

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500 ntABIE53_002765 and ABIE53_002766 are separated by 227 nucleotidesABIE53_002766 and ABIE53_002767 are separated by 134 nucleotidesABIE53_002767 and ABIE53_002768 are separated by 157 nucleotidesABIE53_002768 and ABIE53_002769 overlap by 8 nucleotides ABIE53_002765: ABIE53_002765 - pimeloyl-ACP methyl ester carboxylesterase, at 3,111,453 to 3,112,256 _002765 ABIE53_002766: ABIE53_002766 - competence protein ComEC, at 3,112,484 to 3,115,333 _002766 ABIE53_002767: ABIE53_002767 - TatD DNase family protein, at 3,115,468 to 3,116,256 _002767 ABIE53_002768: ABIE53_002768 - lipoprotein-releasing system ATP-binding protein, at 3,116,414 to 3,117,157 _002768 ABIE53_002769: ABIE53_002769 - lipoprotein-releasing system permease protein, at 3,117,150 to 3,118,403 _002769
Group Condition ABIE53_002765 ABIE53_002766 ABIE53_002767 ABIE53_002768 ABIE53_002769
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=19_days -0.5 +0.0 -0.3 N.D. N.D.
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=19_days -0.5 -0.3 +0.2 N.D. N.D.
carbon source D,L-Malic Acid (C) +0.2 -0.3 -0.3 N.D. N.D.
soil extract Indole-3-pyruvic 5 mM in soil extract +0.2 +0.1 -0.6 N.D. N.D.
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=liquid_soil_extract; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.3 +0.3 -0.2 N.D. N.D.
carbon source D-Gluconic Acid (C) +0.3 -0.3 -0.2 N.D. N.D.
carbon source D-Glucuronic Acid (C) +0.6 -0.3 -0.3 N.D. N.D.
carbon source butyrate (C) -0.2 -0.1 +0.4 N.D. N.D.
plant outgrowth control Plant outgrowth control +0.1 +0.4 -0.5 N.D. N.D.
carbon source Tween 20 (C) +0.6 -0.3 -0.2 N.D. N.D.
carbon source D-Sorbitol (C) +0.6 -0.2 -0.2 N.D. N.D.
carbon source m-Inositol (C) +0.5 -0.2 -0.1 N.D. N.D.
carbon source D-Fructose (C) +0.5 -0.2 -0.1 N.D. N.D.
carbon source D-Lactate (C) +0.3 -0.3 +0.4 N.D. N.D.
carbon source D-Glucose (C) +0.7 -0.2 -0.0 N.D. N.D.
carbon source L-Histidine (C) +0.5 -0.3 +0.2 N.D. N.D.
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=root; GrowthSubstrate=sterile_soil; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.2 +0.3 +0.4 N.D. N.D.
carbon source D-Serine (C) +0.4 -0.2 +0.4 N.D. N.D.
plant outgrowth control Plant outgrowth control -0.1 +0.5 +0.3 N.D. N.D.
in planta Plant=Arabidopsis_thaliana; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.5 +0.3 -0.0 N.D. N.D.
carbon source Acetylated xylan 10 g/L (C) +0.1 +0.5 +0.1 N.D. N.D.
stress RCH2_defined_glucose_5mM with Sucrose 5 mM +0.6 +0.2 +0.1 N.D. N.D.
plant outgrowth control Plant outgrowth control +0.3 +0.4 +0.1 N.D. N.D.
soil extract 4-Hydroxybenzoic Acid 5 mM in soil extract +0.4 +0.3 +0.3 N.D. N.D.
in planta Plant=no_plant; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.4 +0.1 +0.5 N.D. N.D.
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_liquid; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.3 +0.1 +0.5 N.D. N.D.
carbon source Acetylated xylan 10 g/L (C) +0.6 +0.3 +0.1 N.D. N.D.
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=clay; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.2 +0.1 +0.7 N.D. N.D.
plant outgrowth control Plant outgrowth control +0.4 +0.3 +0.3 N.D. N.D.
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_liquid; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.6 +0.3 +0.1 N.D. N.D.
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