Fitness for 5 genes in Paraburkholderia graminis OAS925

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500 ntABIE53_002729 and ABIE53_002730 are separated by 254 nucleotidesABIE53_002730 and ABIE53_002731 are separated by 3 nucleotidesABIE53_002731 and ABIE53_002732 are separated by 244 nucleotidesABIE53_002732 and ABIE53_002733 are separated by 244 nucleotides ABIE53_002729: ABIE53_002729 - KUP system potassium uptake protein, at 3,074,286 to 3,076,172 _002729 ABIE53_002730: ABIE53_002730 - hypoxanthine phosphoribosyltransferase, at 3,076,427 to 3,077,017 _002730 ABIE53_002731: ABIE53_002731 - adenylosuccinate synthase, at 3,077,021 to 3,078,367 _002731 ABIE53_002732: ABIE53_002732 - ATP phosphoribosyltransferase regulatory subunit, at 3,078,612 to 3,079,763 _002732 ABIE53_002733: ABIE53_002733 - uncharacterized protein YjeT (DUF2065 family), at 3,080,008 to 3,080,199 _002733
Group Condition ABIE53_002729 ABIE53_002730 ABIE53_002731 ABIE53_002732 ABIE53_002733
stress RCH2_defined_glucose_5mM with Lumazine 5 mM -3.1 +0.3 N.D. N.D. -2.9
stress RCH2_defined_glucose_5mM with Chlorogenic 2 mM -2.2 +0.0 N.D. N.D. -3.1
stress RCH2_defined_glucose_5mM with caffeic 0.5 mM -1.9 -0.0 N.D. N.D. -3.2
in planta Plant=no_plant; PlantTreatment=None; Sample=soil; GrowthSubstrate=liquid_soil_extract; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -2.2 -0.1 N.D. N.D. -2.7
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sterile_soil; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -1.8 -0.1 N.D. N.D. -3.0
stress RCH2_defined_glucose_5mM with Ferulic Acid 5 mM -2.4 -0.0 N.D. N.D. -2.3
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=root; GrowthSubstrate=liquid_soil_extract; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=19_days -3.6 +0.2 N.D. N.D. -1.2
soil extract 4-Hydroxybenzoic Acid 5 mM in soil extract -3.0 +0.0 N.D. N.D. -1.5
in planta Plant=no_plant; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -2.3 -0.1 N.D. N.D. -2.0
soil extract 4-Hydroxybenzoic Acid 5 mM in soil extract -3.3 -0.1 N.D. N.D. -1.0
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=clay; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -2.9 -0.2 N.D. N.D. -1.3
stress RCH2_defined_glucose_5mM with 4-Hydroxybenzoic Acid 5 mM -2.2 +0.1 N.D. N.D. -2.3
in planta Plant=no_plant; PlantTreatment=None; Sample=soil; GrowthSubstrate=clay; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -3.8 -0.1 N.D. N.D. -0.4
in planta Plant=switchgrass; PreTreatment=None; PlantTreatment=low_phosphate; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=R2A_with_kan10; Time=21days -2.9 +0.2 N.D. N.D. -1.6
stress M9 with Ethanol 2.5 vol% -3.0 +0.2 N.D. N.D. -1.3
in planta Plant=no_plant; PlantTreatment=None; Sample=soil; GrowthSubstrate=liquid_soil_extract; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -3.8 +0.3 N.D. N.D. -0.5
carbon source shik 20mM -4.2 +0.1 N.D. N.D. +0.3
carbon source fumaric 20mM -3.9 -0.2 N.D. N.D. +0.4
in planta Plant=no_plant; PlantTreatment=None; Sample=soil; GrowthSubstrate=clay; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -3.8 -0.2 N.D. N.D. +0.3
carbon source Citric Acid 20 mM (C) -3.9 +0.0 N.D. N.D. +0.4
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=liquid_soil_extract; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -3.2 +0.6 N.D. N.D. -0.8
carbon source shik 20mM -4.3 +0.0 N.D. N.D. +0.9
carbon source fumaric 20mM -3.8 -0.1 N.D. N.D. +0.6
in planta Plant=Brachypodium_distachyon; PreTreatment=None; PlantTreatment=low_phosphate; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=R2A_with_kan10; Time=21days -2.0 +0.6 N.D. N.D. -1.7
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=root; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=19_days -4.0 +0.2 N.D. N.D. +0.8
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=19_days -3.7 +0.2 N.D. N.D. +1.3
in planta Plant=Medicago_truncatula; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sterile_soil; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=19_days -3.4 +0.4 N.D. N.D. +1.1
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=19_days -3.4 +0.4 N.D. N.D. +1.5
stress RCH2_defined_glucose_5mM with Adenine 5 mM +0.9 +0.7 N.D. N.D. -3.0
soil extract Adenine 5 mM in soil extract +2.1 +0.7 N.D. N.D. -1.7
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