Fitness for 5 genes in Paraburkholderia graminis OAS925

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	ABIE53_002684	ABIE53_002685	ABIE53_002686	ABIE53_002687	ABIE53_002688
in planta	Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=clay; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days	-0.8	-0.0	+0.0	-0.4	-1.6
plant outgrowth control	Plant outgrowth control	-1.8	-0.1	+0.1	-0.4	-0.2
in planta	Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_liquid; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days	-1.0	-0.5	+0.2	-0.4	-0.6
in planta	Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=liquid_soil_extract; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=19_days	-0.8	-0.1	-0.1	-0.2	-1.1
in planta	Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=clay; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days	-0.3	-0.7	+0.0	-0.5	-0.6
in planta	Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days	-0.3	+0.1	-0.4	-0.5	-0.9
in planta	Plant=no_plant; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days	-0.2	-0.8	-0.0	-0.4	-0.5
in planta	Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=19_days	-0.8	-0.6	+0.2	-0.5	-0.2
in planta	Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=19_days	-0.6	-0.4	+0.1	-1.0	-0.0
soil extract	Indole-3-pyruvic 5 mM in soil extract	-1.2	-0.2	-0.0	+0.2	-0.5
carbon source	Cinnamic and Ethanols	-0.6	+0.4	+0.2	-0.3	-1.3
stress	R2A with Propan-1-ol 13 g/L	-1.1	+0.2	-0.1	-0.0	-0.5
in planta	Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=root; GrowthSubstrate=sterile_soil; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days	-1.1	+0.3	-0.1	-0.4	-0.1
stress	R2A with Ethanol 2.5 vol%	-2.1	+0.3	+0.2	+0.2	+0.2
in planta	Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sterile_soil; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days	-0.8	+0.5	+0.2	-0.3	-0.8
plant outgrowth control	Plant outgrowth control	-1.1	-0.2	+0.4	-0.4	+0.3
plant outgrowth control	Plant outgrowth control	-0.6	-0.3	+0.4	-0.7	+0.0
in planta	Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days	-0.0	+0.7	-0.1	-0.4	-1.0
stress	R2A with (5z)-4-bromo-5-(bromomethylene)-2(5h)-furanone 10 uM	-0.7	+0.4	+0.4	-0.4	-0.5
r2a outgrowth control	R2A outgrowth control	-0.8	+0.4	+0.3	-0.1	-0.4
plant outgrowth control	Plant outgrowth control	-0.8	-0.5	+0.2	-0.2	+0.6
carbon source	Acetylated xylan 10 g/L (C)	+0.3	+0.3	+0.5	-1.0	-0.6
in planta	Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=clay; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days	+0.5	-0.4	+0.4	-0.4	-0.6
plant outgrowth control	Plant outgrowth control	-0.9	-0.4	+0.5	-0.3	+0.7
stress	M9 with Chloride 200 mM	+0.1	-1.1	-0.0	+0.4	+0.2
in planta	Plant=no_plant; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days	-0.3	+0.6	-0.2	-1.2	+1.1
stress	R2A with Ethanol 2.5 vol%	-0.7	+0.5	+0.2	+0.3	-0.3
carbon source	Tween 20 (C)	-1.3	+0.3	+0.3	+0.1	+0.9
carbon source	Acetylated xylan 10 g/L (C)	+0.2	+0.6	+0.5	-0.6	-0.3
r2a outgrowth control	R2A outgrowth control	-0.7	+0.0	+0.2	-0.2	+1.2