Fitness for 5 genes in Paraburkholderia graminis OAS925

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	ABIE53_002636	ABIE53_002637	ABIE53_002638	ABIE53_002639	ABIE53_002640
r2a outgrowth control	R2A outgrowth control	-0.1	+0.3	N.D.	-1.6	-3.6
in planta	Plant=no_plant; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days	-0.3	+0.2	N.D.	-1.0	-2.6
in planta	Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days	-0.1	-0.6	N.D.	+0.1	-2.9
r2a outgrowth control	R2A outgrowth control	-0.1	+0.0	N.D.	-0.8	-2.7
in planta	Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=clay; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days	-0.1	+0.1	N.D.	-0.0	-3.5
soil extract	caffeic 5 mM in soil extract	-0.1	+0.2	N.D.	-0.8	-2.4
in planta	Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=clay; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days	-0.1	+0.1	N.D.	-0.2	-2.9
in planta	Plant=no_plant; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days	+0.0	+0.1	N.D.	-0.4	-2.7
in planta	Plant=no_plant; PlantTreatment=None; Sample=soil; GrowthSubstrate=clay; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days	-0.1	-0.1	N.D.	-0.1	-2.6
in planta	Plant=no_plant; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_liquid; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days	-0.0	-0.1	N.D.	+0.2	-2.9
in planta	Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_liquid; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days	+0.3	-0.3	N.D.	-0.4	-2.5
r2a outgrowth control	R2A outgrowth control	-0.1	-0.0	N.D.	+0.1	-2.6
carbon source	Inosine (C)	-0.2	-0.3	N.D.	-0.3	-1.9
stress	RCH2_defined_glucose_5mM with Chlorogenic 1 mM	+0.2	-0.1	N.D.	-0.6	-2.1
in planta	Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=19_days	-0.1	+0.2	N.D.	-0.4	-2.3
in planta	Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=19_days	+0.1	-0.0	N.D.	-0.9	-1.8
carbon source	D-Arabinose (C)	+0.1	+0.1	N.D.	+0.2	-2.9
carbon source	Laminarin 10 g/L (C)	-0.2	-0.6	N.D.	+0.2	-1.9
stress	RCH2_defined_glucose_5mM with Shikimic Acid 5 mM	+0.1	+0.5	N.D.	-0.5	-2.5
carbon source	D-Sorbitol (C)	+0.1	+0.3	N.D.	-0.5	-2.3
in planta	Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_liquid; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days	-0.2	-0.0	N.D.	+0.2	-2.3
stress	RCH2_defined_glucose_5mM with Cinnamic 5 mM	-0.0	+0.3	N.D.	-0.0	-2.5
carbon source	Shikimic Acid (C)	+0.1	-0.2	N.D.	+0.3	-2.3
stress	RCH2_defined_glucose_5mM with Adenine 4 mM	-0.1	+0.4	N.D.	-0.7	-1.5
stress	RCH2_defined_glucose_5mM with Pyridoxal 1 mM	-0.4	-0.3	N.D.	-1.5	+0.4
carbon source	casaminos (C)	+0.2	+0.1	N.D.	+0.3	-2.2
stress	RCH2_defined_glucose_5mM with Epiandrosterone 5 mM	+0.2	+0.3	N.D.	-0.9	-1.2
stress	M9 with Chloride 200 mM	+0.0	+0.3	N.D.	+0.9	-1.5
in planta	Plant=Brachypodium_distachyon; PreTreatment=None; PlantTreatment=low_phosphate; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=R2A_with_kan10; Time=21days	+0.1	-0.7	N.D.	-1.2	+2.3
in planta	Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=clay; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days	-0.2	+0.2	N.D.	-0.3	+2.1