Fitness for 5 genes in Paraburkholderia graminis OAS925

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 488 experiments or choose conditions or try the comparative fitness browser

500 ntABIE53_002611 and ABIE53_002612 are separated by 42 nucleotidesABIE53_002612 and ABIE53_002613 are separated by 224 nucleotidesABIE53_002613 and ABIE53_002614 are separated by 220 nucleotidesABIE53_002614 and ABIE53_002615 are separated by 110 nucleotides ABIE53_002611: ABIE53_002611 - putative oxidoreductase, at 2,942,036 to 2,942,797 _002611 ABIE53_002612: ABIE53_002612 - short-subunit dehydrogenase, at 2,942,840 to 2,943,577 _002612 ABIE53_002613: ABIE53_002613 - transcriptional regulator GlxA family with amidase domain, at 2,943,802 to 2,944,773 _002613 ABIE53_002614: ABIE53_002614 - thioredoxin reductase (NADPH), at 2,944,994 to 2,946,643 _002614 ABIE53_002615: ABIE53_002615 - pyruvate/2-oxoglutarate dehydrogenase complex dihydrolipoamide dehydrogenase (E3) component, at 2,946,754 to 2,948,124 _002615
Group Condition ABIE53_002611 ABIE53_002612 ABIE53_002613 ABIE53_002614 ABIE53_002615
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=root; GrowthSubstrate=sterile_soil; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.7 -1.4 -0.1 -0.0 -0.6
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=19_days -0.2 -1.1 -0.6 -0.3 -0.6
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=root; GrowthSubstrate=sterile_soil; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -1.1 -1.2 -0.3 -0.2 +0.1
carbon source D-Gluconic Acid (C) -0.5 -1.3 +0.0 -0.4 -0.5
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_liquid; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.7 -0.8 -1.0 -0.1 -0.0
carbon source D,L-Malic Acid (C) -0.6 -1.2 -0.5 +0.2 -0.5
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=root; GrowthSubstrate=sterile_soil; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=19_days -1.2 -0.8 -0.4 +0.4 -0.3
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sterile_soil; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -1.0 -1.3 -0.2 +0.0 +0.0
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sterile_soil; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.7 -0.9 +0.2 -0.5 -0.1
stress R2A with Salicylic 10 uM -0.8 -0.5 -0.3 -0.2 -0.0
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_liquid; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.5 -0.6 -0.6 -0.1 +0.1
carbon source Laminarin 10 g/L (C) -0.3 -0.2 -1.2 -0.0 +0.1
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.9 -0.2 -0.1 -0.5 +0.3
stress R2A with Tricalcium phosphate 0.5 g/L -0.4 -0.6 -0.5 -0.1 +0.4
stress R2A with (5z)-4-bromo-5-(bromomethylene)-2(5h)-furanone 10 uM -0.5 -0.5 -0.4 -0.2 +0.3
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sterile_soil; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.1 -0.7 -0.8 -0.2 +0.4
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=19_days -0.3 -1.1 -0.1 +0.1 +0.3
in planta Plant=Brachypodium_distachyon; PreTreatment=None; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=R2A_with_kan10; Time=21days +0.5 -0.9 -0.4 -0.2 +0.1
in planta Plant=Brachypodium_distachyon; PreTreatment=None; PlantTreatment=low_phosphate; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=R2A_with_kan10; Time=21days +0.3 -0.7 -0.3 -0.4 +0.3
in planta Plant=switchgrass; PreTreatment=None; PlantTreatment=low_phosphate; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=R2A_with_kan10; Time=21days +0.9 -0.4 -0.6 -0.4 -0.2
in planta Plant=no_plant; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_liquid; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.7 +0.2 -0.6 -0.3 -0.4
carbon source D-Glucosamine Hydrochloride (C) -0.7 +0.6 +0.2 +0.2 -0.4
in planta Plant=no_plant; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.8 +0.2 -0.1 -0.4 -0.5
stress RCH2_defined_glucose_5mM with Sucrose 5 mM +0.7 +0.6 -0.6 -0.2 -0.4
stress RCH2_defined_glucose_5mM with Adenine 5 mM +0.9 +0.1 -0.1 -0.3 -0.4
in planta Plant=Arabidopsis_thaliana; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.3 +1.3 -0.7 -0.3 +0.4
r2a outgrowth control R2A outgrowth control +0.9 +0.3 -0.3 -0.1 +0.3
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=clay; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.8 +0.7 +0.1 +0.1 -0.2
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=clay; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.6 +0.6 -0.3 +0.2 +0.2
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_liquid; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +1.5 +0.5 -0.1 -0.3 -0.0
remove
ABIE53_002611
plot		 remove
ABIE53_002612
plot		 remove
ABIE53_002613		 remove
ABIE53_002614
plot		 remove
ABIE53_002615
plot