Fitness for 5 genes in Paraburkholderia graminis OAS925

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500 ntABIE53_002507 and ABIE53_002508 are separated by 235 nucleotidesABIE53_002508 and ABIE53_002509 overlap by 4 nucleotidesABIE53_002509 and ABIE53_002510 are separated by 118 nucleotidesABIE53_002510 and ABIE53_002511 overlap by 4 nucleotides ABIE53_002507: ABIE53_002507 - [protein-PII] uridylyltransferase, at 2,822,965 to 2,825,544 _002507 ABIE53_002508: ABIE53_002508 - hypothetical protein, at 2,825,780 to 2,826,919 _002508 ABIE53_002509: ABIE53_002509 - 23S rRNA pseudouridine2604 synthase, at 2,826,916 to 2,827,956 _002509 ABIE53_002510: ABIE53_002510 - peptide deformylase, at 2,828,075 to 2,828,608 _002510 ABIE53_002511: ABIE53_002511 - DNA ligase (NAD+), at 2,828,605 to 2,830,686 _002511
Group Condition ABIE53_002507 ABIE53_002508 ABIE53_002509 ABIE53_002510 ABIE53_002511
stress RCH2_defined_glucose_5mM with Pyridoxal 1 mM -0.7 N.D. -0.7 -4.3 N.D.
stress RCH2_defined_glucose_5mM with Pyridoxal 1 mM -0.5 N.D. -0.3 -4.7 N.D.
stress R2A with Propan-1-ol 13 g/L -3.4 N.D. -0.1 -1.6 N.D.
stress M9 with Chloride 200 mM -0.5 N.D. -0.3 -4.0 N.D.
stress M9 with Chloride 200 mM -0.5 N.D. +0.0 -3.8 N.D.
stress M9 with Chloride 200 mM -0.9 N.D. -0.3 -3.0 N.D.
stress M9 with Chloride 200 mM -0.7 N.D. +0.2 -3.6 N.D.
stress R2A with Propan-1-ol 13 g/L -2.6 N.D. +0.1 -1.5 N.D.
stress R2A with Propan-1-ol 13 g/L -3.3 N.D. +0.0 -0.8 N.D.
in planta Plant=no_plant; PlantTreatment=None; Sample=soil; GrowthSubstrate=liquid_soil_extract; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -2.6 N.D. -0.7 -0.7 N.D.
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=clay; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -3.0 N.D. -0.1 -0.5 N.D.
in planta Plant=no_plant; PlantTreatment=None; Sample=soil; GrowthSubstrate=liquid_soil_extract; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -3.1 N.D. -0.1 -0.4 N.D.
stress R2A with Isopropyl alcohol 21 g/L -2.1 N.D. -0.2 -1.1 N.D.
stress RCH2_defined_glucose_5mM with caffeic 1 mM -2.7 N.D. -0.1 -0.5 N.D.
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=liquid_soil_extract; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -2.8 N.D. -0.2 -0.2 N.D.
in planta Plant=no_plant; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -2.4 N.D. -0.2 -0.6 N.D.
in planta Plant=no_plant; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -2.0 N.D. -0.5 -0.8 N.D.
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=clay; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -1.6 N.D. -0.1 -1.5 N.D.
in planta Plant=no_plant; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -2.6 N.D. -0.4 -0.1 N.D.
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=clay; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -3.1 N.D. -0.2 +0.2 N.D.
stress RCH2_defined_glucose_5mM with caffeic 1 mM -2.3 N.D. -0.5 -0.4 N.D.
in planta Plant=no_plant; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -2.5 N.D. -0.3 -0.3 N.D.
in planta Plant=no_plant; PlantTreatment=None; Sample=soil; GrowthSubstrate=clay; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -2.9 N.D. +0.1 -0.2 N.D.
stress R2A with 3-methyl-3-butenol 4.5 g/L -3.1 N.D. +0.2 -0.1 N.D.
stress R2A with Isopropyl alcohol 21 g/L -2.0 N.D. +0.1 -1.0 N.D.
in planta Plant=no_plant; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -3.1 N.D. -0.2 +0.4 N.D.
stress R2A with Isopropyl alcohol 21 g/L -2.3 N.D. +0.2 -0.7 N.D.
in planta Plant=no_plant; PlantTreatment=None; Sample=soil; GrowthSubstrate=clay; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -2.8 N.D. -0.1 +0.4 N.D.
stress R2A with 3-methyl-3-butenol 4.5 g/L -2.8 N.D. +0.2 +0.1 N.D.
stress R2A with 3-methyl-3-butenol 4.5 g/L -2.9 N.D. +0.2 +0.5 N.D.
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