Fitness for 5 genes in Paraburkholderia graminis OAS925

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 488 experiments or choose conditions or try the comparative fitness browser

500 ntABIE53_002481 and ABIE53_002482 are separated by 100 nucleotidesABIE53_002482 and ABIE53_002483 are separated by 132 nucleotidesABIE53_002483 and ABIE53_002484 are separated by 96 nucleotidesABIE53_002484 and ABIE53_002485 are separated by 177 nucleotides ABIE53_002481: ABIE53_002481 - ribosome-associated toxin RatA of RatAB toxin-antitoxin module, at 2,798,633 to 2,799,070 _002481 ABIE53_002482: ABIE53_002482 - SsrA-binding protein, at 2,799,171 to 2,799,617 _002482 ABIE53_002483: ABIE53_002483 - regulator of protease activity HflC (stomatin/prohibitin superfamily), at 2,799,750 to 2,800,685 _002483 ABIE53_002484: ABIE53_002484 - membrane protein implicated in regulation of membrane protease activity, at 2,800,782 to 2,801,237 _002484 ABIE53_002485: ABIE53_002485 - pyruvate,water dikinase, at 2,801,415 to 2,803,820 _002485
Group Condition ABIE53_002481 ABIE53_002482 ABIE53_002483 ABIE53_002484 ABIE53_002485
in planta Plant=no_plant; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days N.D. N.D. -1.0 -0.6 -4.0
in planta Plant=no_plant; PlantTreatment=None; Sample=soil; GrowthSubstrate=clay; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days N.D. N.D. -0.7 -0.4 -3.8
carbon source L-Tryptophan (C) N.D. N.D. -0.2 -0.4 -4.2
in planta Plant=no_plant; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days N.D. N.D. -0.6 +0.1 -4.1
carbon source propionate (C) N.D. N.D. -0.2 +0.2 -4.5
in planta Plant=no_plant; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days N.D. N.D. -0.5 -0.3 -3.7
in planta Plant=no_plant; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days N.D. N.D. -0.1 -0.1 -4.3
carbon source D-Alanine (C) N.D. N.D. +0.1 -0.2 -4.3
carbon source L-Phenylalanine (C) N.D. N.D. +0.1 -0.1 -4.4
carbon source L-Phenylalanine (C) N.D. N.D. +0.3 +0.0 -4.6
carbon source L-Alanine (C) N.D. N.D. +0.2 -0.3 -4.2
carbon source Citric Acid (C) N.D. N.D. -0.2 +0.2 -4.2
carbon source fumaric 20mM N.D. N.D. -0.0 +0.3 -4.4
nitrogen source Ammonium chloride 0.5 mM (N) N.D. N.D. +0.3 +0.1 -4.1
in planta Plant=no_plant; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_liquid; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days N.D. N.D. +0.1 +0.4 -4.0
carbon source acetate (C) N.D. N.D. +0.1 +0.4 -3.9
in planta Plant=no_plant; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_liquid; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days N.D. N.D. +0.3 +0.5 -4.2
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sterile_soil; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days N.D. N.D. -0.8 +0.6 -3.1
carbon source D,L-Lactate (C) N.D. N.D. +0.4 +0.3 -3.9
carbon source L-Glutamic (C) N.D. N.D. +0.2 +0.6 -3.9
carbon source pyruvate (C) N.D. N.D. +0.4 +0.3 -3.8
in planta Plant=no_plant; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_liquid; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days N.D. N.D. +0.1 +0.9 -3.7
nitrogen source Ammonium chloride 30 mM (N) N.D. N.D. +0.6 +0.7 -3.9
carbon source D,L-Malic Acid (C) N.D. N.D. +0.5 +0.8 -3.8
in planta Plant=no_plant; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_liquid; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days N.D. N.D. +0.4 +0.7 -3.7
carbon source L-Proline (C) N.D. N.D. +0.6 +0.6 -3.5
carbon source L-Fucose (C) N.D. N.D. +0.9 +0.4 -3.4
carbon source D-Galacturonic Acid (C) N.D. N.D. +0.7 +1.1 -2.8
carbon source D-Galacturonic Acid (C) N.D. N.D. +1.0 +0.8 -2.7
carbon source L-Histidine (C) N.D. N.D. +0.9 +1.3 -2.8
remove
ABIE53_002481
plot		 remove
ABIE53_002482
plot		 remove
ABIE53_002483		 remove
ABIE53_002484
plot		 remove
ABIE53_002485
plot