Fitness for 5 genes in Paraburkholderia graminis OAS925

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 488 experiments or choose conditions or try the comparative fitness browser

500 ntABIE53_002456 and ABIE53_002457 are separated by 88 nucleotidesABIE53_002457 and ABIE53_002458 are separated by 31 nucleotidesABIE53_002458 and ABIE53_002459 are separated by 53 nucleotidesABIE53_002459 and ABIE53_002460 are separated by 21 nucleotides ABIE53_002456: ABIE53_002456 - NodT family efflux transporter outer membrane factor (OMF) lipoprotein, at 2,758,427 to 2,759,983 _002456 ABIE53_002457: ABIE53_002457 - membrane fusion protein (multidrug efflux system), at 2,760,072 to 2,761,334 _002457 ABIE53_002458: ABIE53_002458 - DHA2 family multidrug resistance protein, at 2,761,366 to 2,762,928 _002458 ABIE53_002459: ABIE53_002459 - short-chain fatty acids transporter, at 2,762,982 to 2,764,436 _002459 ABIE53_002460: ABIE53_002460 - ornithine cyclodeaminase/alanine dehydrogenase-like protein (mu-crystallin family), at 2,764,458 to 2,765,393 _002460
Group Condition ABIE53_002456 ABIE53_002457 ABIE53_002458 ABIE53_002459 ABIE53_002460
stress RCH2_defined_glucose_5mM with Lumazine 5 mM -1.3 -1.2 -0.3 -0.2 -0.2
stress RCH2_defined_glucose_5mM with Lumazine 5 mM -0.8 -1.3 -0.3 +0.1 -0.7
carbon source Azelaic 20 mM (C) -1.8 -1.4 -0.2 -0.1 +0.6
carbon source Azelaic 20 mM (C) -1.7 -1.3 -0.1 +0.0 +0.7
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=19_days -0.3 -0.4 +0.3 -0.4 -0.7
in planta Plant=Arabidopsis_thaliana; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.1 +0.0 -0.3 -0.2 +1.3
in planta Plant=Brachypodium_distachyon; PreTreatment=None; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=R2A_with_kan10; Time=21days +0.7 +0.8 +0.2 -0.3 -0.4
in planta Plant=Brachypodium_distachyon; PreTreatment=None; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=R2A_with_kan10; Time=21days +0.5 +0.8 -0.1 +0.1 +0.2
carbon source Cinnamic and Ethanols +0.7 +1.1 -0.0 -0.4 +0.5
stress RCH2_defined_glucose_5mM with 4-Pyridoxic 5 mM +0.6 +0.5 -0.0 +0.1 +0.7
stress RCH2_defined_glucose_5mM with Cinnamic 5 mM +1.0 +0.8 +0.1 +0.2 +0.0
stress RCH2_defined_glucose_5mM with 4-Pyridoxic 5 mM +0.5 +0.6 +0.0 +0.4 +0.4
soil extract Indole-3-pyruvic 5 mM in soil extract +0.4 +0.1 +0.0 -0.2 +1.8
soil extract Indole-3-pyruvic 5 mM in soil extract +0.2 +0.2 +0.1 -0.0 +1.8
stress RCH2_defined_glucose_5mM with Chlorogenic 2 mM +1.0 +0.9 +0.1 +0.0 +0.3
stress RCH2_defined_glucose_5mM with Cinnamic 5 mM +1.2 +0.9 +0.1 +0.0 +0.3
stress RCH2_defined_glucose_5mM with Chlorogenic 2 mM +1.1 +0.9 +0.1 +0.0 +0.3
carbon source Salicylic and Ethanols +0.8 +1.0 +0.0 -0.0 +0.8
carbon source 4-Hydroxybenzoic Acid (C) +0.6 +0.9 -0.1 -0.2 +1.3
stress RCH2_defined_glucose_5mM with Indole-3-pyruvic 1 mM +1.2 +1.2 +0.2 -0.1 +0.1
stress RCH2_defined_glucose_5mM with Indole-3-pyruvic 1 mM +1.2 +1.3 +0.1 -0.0 +0.4
carbon source Shikimic Acid (C) +0.9 +0.9 +0.0 -0.0 +1.2
stress RCH2_defined_glucose_5mM with Salicylic 5 mM +1.0 +1.1 +0.2 +0.0 +0.6
carbon source Cinnamic and Ethanols +0.9 +1.0 +0.2 -0.1 +1.1
carbon source Cinnamic and Ethanols +0.9 +1.1 +0.3 -0.2 +1.0
stress RCH2_defined_glucose_5mM with caffeic 1 mM +1.6 +1.7 +0.1 +0.2 -0.1
stress RCH2_defined_glucose_5mM with caffeic 0.5 mM +1.5 +1.5 +0.3 +0.1 +0.3
stress RCH2_defined_glucose_5mM with caffeic 0.5 mM +1.6 +1.6 +0.2 +0.1 +0.2
carbon source 4-Hydroxybenzoic Acid (C) +0.9 +1.2 +0.1 -0.1 +1.8
stress RCH2_defined_glucose_5mM with caffeic 1 mM +1.7 +1.9 -0.0 +0.2 +0.2
remove
ABIE53_002456
plot		 remove
ABIE53_002457
plot		 remove
ABIE53_002458		 remove
ABIE53_002459
plot		 remove
ABIE53_002460
plot