Fitness for 5 genes in Paraburkholderia graminis OAS925

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	ABIE53_002446	ABIE53_002447	ABIE53_002448	ABIE53_002449	ABIE53_002450
in planta	Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=root; GrowthSubstrate=sterile_soil; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days	-2.7	-0.2	+0.4	-0.5	-2.5
plant outgrowth control	Plant outgrowth control	-2.2	-0.2	-0.2	-0.3	-1.7
in planta	Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=liquid_soil_extract; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=19_days	-2.0	-0.1	+0.3	-0.1	-2.5
in planta	Plant=no_plant; PlantTreatment=None; Sample=soil; GrowthSubstrate=liquid_soil_extract; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days	-1.3	-0.1	+0.3	-0.3	-3.1
stress	RCH2_defined_glucose_5mM with Pyridoxal 1 mM	-1.8	+0.0	-0.2	-0.1	-2.1
in planta	Plant=no_plant; PlantTreatment=None; Sample=soil; GrowthSubstrate=clay; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days	-2.4	+0.1	-0.3	-0.2	-1.3
in planta	Plant=no_plant; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_liquid; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days	-1.9	-0.2	-0.4	-0.1	-1.3
motility_chemotaxis	Motility_chemotaxis; Brachypodium roots in 0.5x MS; outer cut	-1.9	-0.0	-0.6	+0.0	-1.3
in planta	Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=clay; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days	-0.8	+0.4	-0.2	-0.1	-3.1
stress	RCH2_defined_glucose_5mM with Salicylic 5 mM	+0.3	+0.0	-0.4	-0.1	-3.4
in planta	Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_liquid; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days	-1.8	+0.2	-1.0	+0.4	-1.3
stress	RCH2_defined_glucose_5mM with 4-Hydroxybenzoic Acid 5 mM	+0.3	-0.2	-0.2	-0.0	-3.3
in planta	Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=liquid_soil_extract; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days	+0.4	-0.0	+0.1	-0.3	-3.2
stress	RCH2_defined_glucose_5mM with Pyridoxal 1 mM	+0.5	-0.0	-0.2	-0.1	-3.2
phage	Burk2_1	+0.5	-0.2	-0.3	-0.2	-2.7
stress	RCH2_defined_glucose_5mM with 4-Hydroxybenzoic Acid 5 mM	+0.5	-0.1	-0.3	-0.3	-2.7
stress	RCH2_defined_glucose_5mM with Chlorogenic 2 mM	+0.6	-0.0	+0.2	-0.2	-3.0
stress	RCH2_defined_glucose_5mM with 4-Pyridoxic 5 mM	+0.8	-0.2	-0.1	-0.0	-2.9
stress	RCH2_defined_glucose_5mM with caffeic 0.5 mM	+1.5	-0.3	-0.2	+0.1	-3.1
phage	Burk1_100	+0.8	+0.1	+0.2	-0.0	-2.9
in planta	Plant=Brachypodium_distachyon; PreTreatment=None; PlantTreatment=low_phosphate; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=R2A_with_kan10; Time=21days	-1.5	+0.2	+0.9	+0.2	-1.5
stress	RCH2_defined_glucose_5mM with Ferulic Acid 5 mM	+1.2	-0.2	+0.0	-0.2	-2.6
stress	RCH2_defined_glucose_5mM with Lumazine 5 mM	+1.2	+0.1	+0.1	-0.1	-3.0
stress	RCH2_defined_glucose_5mM with Indole-3-pyruvic 1 mM	+1.4	-0.0	+0.1	+0.1	-3.2
in planta	Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_liquid; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days	+1.2	-0.1	-0.5	-0.1	-2.1
stress	RCH2_defined_glucose_5mM with Cinnamic 5 mM	+1.2	-0.0	-0.1	+0.1	-2.5
in planta	Plant=Medicago_truncatula; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sterile_soil; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=19_days	+2.1	-0.5	+0.5	+0.7	-2.2
stress	RCH2_defined_glucose_5mM with Adenine 5 mM	+0.7	-0.2	-0.2	-0.0	+2.8
stress	RCH2_defined_glucose_5mM with Adenine 5 mM	+0.2	-0.2	+0.2	-0.0	+3.5
stress	RCH2_defined_glucose_5mM with Adenine 4 mM	+0.5	-0.2	+0.1	+0.2	+3.6