Fitness for 5 genes in Paraburkholderia graminis OAS925

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500 ntABIE53_002413 and ABIE53_002414 are separated by 177 nucleotidesABIE53_002414 and ABIE53_002415 are separated by 89 nucleotidesABIE53_002415 and ABIE53_002416 are separated by 130 nucleotidesABIE53_002416 and ABIE53_002417 are separated by 87 nucleotides ABIE53_002413: ABIE53_002413 - SHS family lactate transporter-like MFS transporter, at 2,708,621 to 2,709,868 _002413 ABIE53_002414: ABIE53_002414 - hypothetical protein, at 2,710,046 to 2,710,168 _002414 ABIE53_002415: ABIE53_002415 - AcrR family transcriptional regulator, at 2,710,258 to 2,711,244 _002415 ABIE53_002416: ABIE53_002416 - acyl-CoA dehydrogenase, at 2,711,375 to 2,713,903 _002416 ABIE53_002417: ABIE53_002417 - 3-oxoacyl-[acyl-carrier protein] reductase, at 2,713,991 to 2,715,433 _002417
Group Condition ABIE53_002413 ABIE53_002414 ABIE53_002415 ABIE53_002416 ABIE53_002417
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_liquid; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.6 N.D. -0.3 -0.0 -0.8
carbon source D-Cellobiose (C) -0.1 N.D. -0.4 -0.2 -0.6
carbon source Shikimic Acid 5 mM (C) -1.1 N.D. -0.2 -0.0 +0.1
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=liquid_soil_extract; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.0 N.D. -0.2 -0.2 -0.7
stress RCH2_defined_glucose_5mM with Adenine 5 mM +0.1 N.D. -0.1 -0.2 -0.9
in planta Plant=Brachypodium_distachyon; PreTreatment=None; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=R2A_with_kan10; Time=21days -0.3 N.D. +0.2 -0.4 -0.6
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_liquid; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.9 N.D. -0.5 +0.0 +0.3
carbon source Acetylated xylan 10 g/L (C) -0.8 N.D. -0.5 +0.0 +0.3
carbon source Azelaic 20 mM (C) -0.4 N.D. +0.2 -0.4 -0.4
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_liquid; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.3 N.D. -0.2 +0.2 -0.7
in planta Plant=no_plant; PlantTreatment=None; Sample=soil; GrowthSubstrate=clay; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.6 N.D. +0.3 -0.3 -0.1
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=liquid_soil_extract; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.4 N.D. +0.3 +0.0 -0.5
stress RCH2_defined_glucose_5mM with Adenine 4 mM -0.3 N.D. +0.4 -0.3 -0.3
r2a outgrowth control R2A outgrowth control -0.2 N.D. -0.6 +0.0 +0.4
in planta Plant=Brachypodium_distachyon; PreTreatment=None; PlantTreatment=low_phosphate; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=R2A_with_kan10; Time=21days -0.1 N.D. +0.3 +0.1 -0.7
in planta Plant=no_plant; PlantTreatment=None; Sample=soil; GrowthSubstrate=liquid_soil_extract; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.5 N.D. +0.5 -0.4 -0.0
stress R2A with PEG 6000 16 vol% +0.4 N.D. -0.1 +0.1 -0.6
in planta Plant=no_plant; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_liquid; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.3 N.D. +0.7 +0.1 -0.8
in planta Plant=no_plant; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.3 N.D. -0.5 +0.3 +0.3
plant outgrowth control Plant outgrowth control -1.0 N.D. -0.2 +0.3 +0.8
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.2 N.D. +0.0 -0.4 +0.6
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sterile_soil; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.5 N.D. +0.1 +0.1 +0.6
plant outgrowth control Plant outgrowth control -0.7 N.D. -0.2 +0.2 +0.9
plant outgrowth control Plant outgrowth control -0.6 N.D. +0.1 +0.2 +0.6
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=liquid_soil_extract; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.3 N.D. +0.5 +0.2 +0.2
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=19_days +1.5 N.D. +0.1 -0.3 -0.6
in planta Plant=Arabidopsis_thaliana; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.1 N.D. -0.2 +0.3 +0.7
r2a outgrowth control R2A outgrowth control -0.3 N.D. +0.4 +0.3 +0.4
m9 no stress control M9 no stress control +0.6 N.D. +0.2 +0.2 -0.2
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.2 N.D. -0.2 +0.1 +0.8
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