Fitness for 5 genes in Paraburkholderia graminis OAS925

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500 ntABIE53_002390 and ABIE53_002391 overlap by 4 nucleotidesABIE53_002391 and ABIE53_002392 are separated by 73 nucleotidesABIE53_002392 and ABIE53_002393 are separated by 240 nucleotidesABIE53_002393 and ABIE53_002394 are separated by 60 nucleotides ABIE53_002390: ABIE53_002390 - ureidoglycolate lyase, at 2,681,586 to 2,682,098 _002390 ABIE53_002391: ABIE53_002391 - allantoicase, at 2,682,095 to 2,683,108 _002391 ABIE53_002392: ABIE53_002392 - OHCU decarboxylase, at 2,683,182 to 2,684,651 _002392 ABIE53_002393: ABIE53_002393 - allantoin racemase, at 2,684,892 to 2,685,719 _002393 ABIE53_002394: ABIE53_002394 - NCS1 family nucleobase:cation symporter-1, at 2,685,780 to 2,687,261 _002394
Group Condition ABIE53_002390 ABIE53_002391 ABIE53_002392 ABIE53_002393 ABIE53_002394
stress RCH2_defined_glucose_5mM with Adenine 5 mM -0.8 -4.4 -3.6 -0.1 -0.1
stress RCH2_defined_glucose_5mM with Adenine 4 mM -1.7 -3.9 -3.2 -0.1 +0.1
stress RCH2_defined_glucose_5mM with Adenine 2 mM -1.9 -4.0 -2.7 -0.3 +0.3
stress RCH2_defined_glucose_5mM with Adenine 4 mM -0.9 -4.4 -2.7 -0.5 +0.0
carbon source Inosine (C) -1.4 -2.5 -3.1 -1.1 -0.0
stress RCH2_defined_glucose_5mM with Adenine 2 mM -1.0 -3.7 -3.0 -0.1 +0.1
stress RCH2_defined_glucose_5mM with Adenine 5 mM +0.7 -4.3 -3.4 +0.1 +0.0
carbon source Inosine (C) -1.4 -2.8 -2.4 +0.0 +0.1
in planta Plant=switchgrass; PreTreatment=None; PlantTreatment=low_phosphate; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=R2A_with_kan10; Time=21days +0.8 -1.2 -1.4 -4.2 -0.1
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=liquid_soil_extract; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.4 -2.0 -1.6 -2.4 +0.5
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=19_days -1.4 -2.2 -1.5 +0.0 -0.7
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_liquid; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.4 -0.9 -1.9 -2.3 -0.3
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_liquid; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.0 -1.5 -1.3 -2.3 -0.3
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_liquid; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.7 -1.0 -1.5 -3.3 -0.2
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=liquid_soil_extract; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.3 -0.3 -1.7 -2.6 -0.3
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_liquid; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.7 -1.6 -1.9 -2.4 -0.1
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=liquid_soil_extract; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.9 -0.6 -1.2 -2.6 -0.0
soil extract Adenine 5 mM in soil extract +0.8 -2.5 -3.1 -0.0 -0.2
carbon source Adenosine (C) -0.0 -2.2 -1.7 -0.6 -0.5
in planta Plant=Brachypodium_distachyon; PreTreatment=None; PlantTreatment=low_phosphate; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=R2A_with_kan10; Time=21days -0.7 -0.7 -1.1 -1.9 -0.5
soil extract Adenine 5 mM in soil extract +0.7 -2.8 -2.9 +0.1 +0.1
in planta Plant=switchgrass; PreTreatment=None; PlantTreatment=low_phosphate; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=R2A_with_kan10; Time=21days +0.1 -1.5 -1.7 -1.1 -0.5
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_liquid; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.2 -0.7 -1.9 -2.2 -0.1
in planta Plant=no_plant; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.4 -0.6 -2.3 -1.8 -0.2
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=liquid_soil_extract; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +1.2 -1.6 -1.9 -1.9 -0.3
nitrogen source Xanthine 5 mM (N) +0.0 -2.6 -2.2 +1.0 -0.2
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=19_days +0.3 -0.1 -1.5 -2.9 +0.3
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=root; GrowthSubstrate=liquid_soil_extract; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=19_days +0.6 -0.5 -1.5 -2.6 +0.4
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=root; GrowthSubstrate=liquid_soil_extract; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=19_days +0.7 -0.4 -2.1 -2.1 +0.5
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_liquid; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +1.4 -0.9 -0.8 -1.7 -0.5
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