Fitness for 5 genes in Paraburkholderia graminis OAS925

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 488 experiments or choose conditions or try the comparative fitness browser

500 ntABIE53_002385 and ABIE53_002386 are separated by 79 nucleotidesABIE53_002386 and ABIE53_002387 are separated by 172 nucleotidesABIE53_002387 and ABIE53_002388 are separated by 118 nucleotidesABIE53_002388 and ABIE53_002389 are separated by 181 nucleotides ABIE53_002385: ABIE53_002385 - DNA-binding transcriptional LysR family regulator, at 2,676,513 to 2,677,445 _002385 ABIE53_002386: ABIE53_002386 - 8-oxoguanine deaminase, at 2,677,525 to 2,678,931 _002386 ABIE53_002387: ABIE53_002387 - hypothetical protein, at 2,679,104 to 2,679,361 _002387 ABIE53_002388: ABIE53_002388 - 5-hydroxyisourate hydrolase, at 2,679,480 to 2,679,833 _002388 ABIE53_002389: ABIE53_002389 - putative membrane protein, at 2,680,015 to 2,681,208 _002389
Group Condition ABIE53_002385 ABIE53_002386 ABIE53_002387 ABIE53_002388 ABIE53_002389
carbon source Inosine (C) -4.2 -0.3 -0.6 -4.3 -3.3
carbon source Inosine (C) -3.4 -0.3 -0.7 -4.3 -3.3
carbon source Adenosine (C) -2.4 -0.4 -0.4 -4.5 -2.5
carbon source Adenosine (C) -2.7 -0.2 -0.4 -4.4 -2.2
stress RCH2_defined_glucose_5mM with Adenine 2 mM -0.4 -0.3 -0.4 -3.6 -3.8
stress RCH2_defined_glucose_5mM with Adenine 2 mM -0.2 -0.5 -0.5 -3.4 -3.7
nitrogen source Xanthine 5 mM (N) -1.2 +0.1 -0.5 -3.1 -2.8
stress R2A with Isopropyl alcohol 21 g/L -0.3 -0.2 -0.1 -5.4 -1.2
stress RCH2_defined_glucose_5mM with Adenine 4 mM +2.3 -0.5 -0.6 -3.2 -4.0
soil extract Adenine 5 mM in soil extract +0.6 -0.1 +0.2 -3.7 -2.7
stress RCH2_defined_glucose_5mM with Adenine 4 mM +2.7 -0.5 -0.3 -3.3 -3.9
soil extract Adenine 5 mM in soil extract +0.6 -0.0 -0.0 -3.7 -2.0
carbon source L-Tryptophan (C) -0.2 -0.1 -0.2 -4.2 -0.1
carbon source Uridine (C) -0.2 -0.1 +0.0 -4.5 +0.0
stress RCH2_defined_glucose_5mM with Adenine 5 mM +3.5 -0.2 -0.5 -3.5 -3.9
stress RCH2_defined_glucose_5mM with Adenine 5 mM +3.4 -0.3 +0.0 -3.6 -4.0
stress RCH2_defined_glucose_5mM with caffeic 1 mM -0.1 +0.2 -0.4 -3.8 -0.0
soil extract Sucrose 5 mM in soil extract -0.0 +0.1 -0.3 -3.5 -0.2
stress RCH2_defined_glucose_5mM with Sucrose 5 mM -0.1 -0.2 -0.1 -3.3 -0.2
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=clay; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.5 -0.1 -0.4 -2.3 -0.5
stress R2A with Propan-1-ol 13 g/L -0.3 -0.2 -0.2 -1.6 -1.6
in planta Plant=no_plant; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.3 +0.1 -0.9 -2.1 -0.4
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=19_days -0.2 +0.3 -0.4 -2.3 -0.9
stress RCH2_defined_glucose_5mM with Lumazine 5 mM +1.5 -1.0 -0.5 -2.3 -1.1
stress M9 with Ethanol 2.5 vol% -0.0 +0.2 +0.4 -3.6 -0.1
carbon source Ethanol (C) +0.1 +0.2 -0.1 -3.4 +0.0
stress RCH2_defined_glucose_5mM with Lumazine 5 mM +1.4 -0.9 -0.6 +1.4 -1.1
carbon source D-Glucose-6-Phosphate (C) +0.3 -0.1 -0.7 +2.8 -0.2
carbon source D-Fructose (C) +0.6 -0.2 -0.6 +2.4 +0.2
carbon source D-Glucose (C) +0.4 -0.0 -0.2 +3.7 -0.0
remove
ABIE53_002385
plot		 remove
ABIE53_002386
plot		 remove
ABIE53_002387		 remove
ABIE53_002388
plot		 remove
ABIE53_002389
plot