Fitness for 5 genes in Paraburkholderia graminis OAS925

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500 ntABIE53_002298 and ABIE53_002299 are separated by 234 nucleotidesABIE53_002299 and ABIE53_002300 are separated by 227 nucleotidesABIE53_002300 and ABIE53_002301 are separated by 165 nucleotidesABIE53_002301 and ABIE53_002302 overlap by 10 nucleotides ABIE53_002298: ABIE53_002298 - hypothetical protein, at 2,580,566 to 2,580,718 _002298 ABIE53_002299: ABIE53_002299 - EmrB/QacA subfamily drug resistance transporter, at 2,580,953 to 2,582,350 _002299 ABIE53_002300: ABIE53_002300 - uncharacterized membrane protein YcaP (DUF421 family), at 2,582,578 to 2,583,072 _002300 ABIE53_002301: ABIE53_002301 - mono/diheme cytochrome c family protein, at 2,583,238 to 2,584,716 _002301 ABIE53_002302: ABIE53_002302 - hypothetical protein, at 2,584,707 to 2,585,147 _002302
Group Condition ABIE53_002298 ABIE53_002299 ABIE53_002300 ABIE53_002301 ABIE53_002302
in planta Plant=switchgrass; PreTreatment=None; PlantTreatment=low_phosphate; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=R2A_with_kan10; Time=21days N.D. -0.5 N.D. -0.4 N.D.
carbon source L-Rhamnose (C) N.D. -0.2 N.D. -0.6 N.D.
in planta Plant=Brachypodium_distachyon; PreTreatment=None; PlantTreatment=low_phosphate; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=R2A_with_kan10; Time=21days N.D. -0.3 N.D. -0.5 N.D.
carbon source D-Serine (C) N.D. -0.3 N.D. -0.5 N.D.
carbon source m-Inositol (C) N.D. -0.1 N.D. -0.6 N.D.
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=clay; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days N.D. -0.2 N.D. -0.5 N.D.
carbon source Tween 20 (C) N.D. -0.2 N.D. -0.5 N.D.
carbon source D-Lactate (C) N.D. -0.4 N.D. -0.3 N.D.
in planta Plant=no_plant; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_liquid; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days N.D. -0.2 N.D. -0.4 N.D.
carbon source succinate (C) N.D. -0.3 N.D. -0.2 N.D.
motility_chemotaxis Motility_chemotaxis; Brachypodium roots in 0.5x MS; outer cut N.D. -0.3 N.D. -0.3 N.D.
carbon source D-Mannose (C) N.D. +0.2 N.D. -0.5 N.D.
in planta Plant=switchgrass; PreTreatment=None; PlantTreatment=low_phosphate; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=R2A_with_kan10; Time=21days N.D. +0.2 N.D. -0.4 N.D.
in planta Plant=no_plant; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_liquid; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days N.D. +0.2 N.D. -0.4 N.D.
r2a no shaking R2A no shaking N.D. -0.4 N.D. +0.3 N.D.
stress RCH2_defined_glucose_5mM with Adenine 4 mM N.D. +0.3 N.D. -0.4 N.D.
motility_chemotaxis Motility_chemotaxis, R2A; outer cut N.D. -0.3 N.D. +0.3 N.D.
carbon source D-Lactate (C) N.D. -0.2 N.D. +0.4 N.D.
stress R2A with Tricalcium phosphate 0.5 g/L N.D. -0.2 N.D. +0.4 N.D.
stress RCH2_defined_glucose_5mM with Adenine 5 mM N.D. +0.5 N.D. -0.2 N.D.
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=19_days N.D. -0.1 N.D. +0.5 N.D.
carbon source Shikimic Acid 5 mM (C) N.D. -0.2 N.D. +0.6 N.D.
carbon source Acetylated xylan 10 g/L (C) N.D. -0.4 N.D. +0.8 N.D.
in planta Plant=no_plant; PlantTreatment=None; Sample=soil; GrowthSubstrate=liquid_soil_extract; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days N.D. -0.1 N.D. +0.6 N.D.
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_liquid; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days N.D. -0.1 N.D. +0.6 N.D.
carbon source Laminarin 10 g/L (C) N.D. -0.3 N.D. +0.8 N.D.
carbon source Acetylated xylan 10 g/L (C) N.D. -0.2 N.D. +0.7 N.D.
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=root; GrowthSubstrate=liquid_soil_extract; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days N.D. +0.6 N.D. +0.0 N.D.
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=liquid_soil_extract; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days N.D. +0.5 N.D. +0.2 N.D.
carbon source Shikimic Acid 5 mM (C) N.D. -0.2 N.D. +0.9 N.D.
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