Fitness for 5 genes in Paraburkholderia graminis OAS925

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	ABIE53_002240	ABIE53_002241	ABIE53_002242	ABIE53_002243	ABIE53_002244
r2a outgrowth control	R2A outgrowth control	-0.7	-0.0	-1.0	-0.4	-2.0
plant outgrowth control	Plant outgrowth control	-1.5	-0.1	-1.5	-0.3	-0.2
stress	M9 with Chloride 200 mM	+0.1	-0.5	-2.3	+0.2	-1.1
r2a outgrowth control	R2A outgrowth control	-0.7	+0.1	-2.0	-0.6	+0.3
in planta	Plant=no_plant; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_liquid; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days	-0.7	-0.3	-1.2	-0.7	+0.1
r2a outgrowth control	R2A outgrowth control	-0.9	-0.0	-1.6	-0.0	+0.4
carbon source	Tween 20 (C)	+0.6	+0.1	-2.0	-0.3	-0.2
soil extract	Indole-3-pyruvic 5 mM in soil extract	-0.1	-1.0	-1.4	+0.5	+0.0
stress	RCH2_defined_glucose_5mM with Serotonin 5 mM	+0.7	+0.2	-2.2	+0.0	-0.6
stress	RCH2_defined_glucose_5mM with Sucrose 5 mM	+0.9	+0.2	-2.4	-0.3	-0.1
carbon source	D-Lactate (C)	+0.4	-0.3	-1.8	+0.0	+0.4
carbon source	L-Tryptophan (C)	+0.5	+0.1	-1.3	-0.8	+0.4
carbon source	D-Glucuronic Acid (C)	+0.5	+0.3	-1.8	-0.4	+0.2
stress	RCH2_defined_glucose_5mM with Ferulic Acid 5 mM	+0.9	+0.1	-1.4	-0.4	-0.2
stress	RCH2_defined_glucose_5mM with caffeic 1 mM	+0.4	-0.2	-1.9	-0.1	+0.9
in planta	Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=19_days	-0.2	+0.2	+1.6	-0.9	-1.6
stress	RCH2_defined_glucose_5mM with caffeic 1 mM	+0.6	+0.0	-2.2	+0.4	+0.5
biofilm	biofilm; planktonic cells from 96 well plate assay in R2A	+0.5	+0.4	-1.9	+0.5	+0.4
stress	RCH2_defined_glucose_5mM with caffeic 0.5 mM	+0.4	-0.1	-1.4	-0.0	+1.0
in planta	Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days	+0.4	+0.5	-1.8	-0.1	+1.1
carbon source	D-Mannose (C)	+0.6	+0.9	-0.0	-0.5	-0.9
in planta	Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_liquid; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days	+0.5	+0.5	+1.0	-0.2	-1.4
carbon source	D-Galactose (C)	+0.7	+0.3	-1.3	+0.3	+0.3
stress	RCH2_defined_glucose_5mM with Adenine 4 mM	+0.4	-0.1	-1.1	+0.4	+1.1
carbon source	Azelaic 20 mM (C)	+0.7	-0.1	-0.9	+0.4	+1.1
in planta	Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=root; GrowthSubstrate=sterile_soil; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days	-0.9	-0.3	+3.2	-0.6	+0.2
plant outgrowth control	Plant outgrowth control	-0.6	-0.1	+2.4	-0.1	+0.1
plant outgrowth control	Plant outgrowth control	-0.4	+0.1	+1.8	-0.2	+0.5
in planta	Plant=no_plant; PlantTreatment=None; Sample=soil; GrowthSubstrate=liquid_soil_extract; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days	-0.1	+0.7	+1.9	-0.2	-0.0
in planta	Plant=no_plant; PlantTreatment=None; Sample=soil; GrowthSubstrate=liquid_soil_extract; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days	-0.3	+0.5	+2.1	+0.3	+0.1