Fitness for 5 genes in Paraburkholderia graminis OAS925

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500 ntABIE53_002210 and ABIE53_002211 are separated by 271 nucleotidesABIE53_002211 and ABIE53_002212 are separated by 102 nucleotidesABIE53_002212 and ABIE53_002213 are separated by 0 nucleotidesABIE53_002213 and ABIE53_002214 are separated by 3 nucleotides ABIE53_002210: ABIE53_002210 - putative porin, at 2,481,404 to 2,482,585 _002210 ABIE53_002211: ABIE53_002211 - lactaldehyde dehydrogenase/glycolaldehyde dehydrogenase, at 2,482,857 to 2,484,311 _002211 ABIE53_002212: ABIE53_002212 - MFS family permease, at 2,484,414 to 2,485,760 _002212 ABIE53_002213: ABIE53_002213 - galactonate dehydratase, at 2,485,761 to 2,486,978 _002213 ABIE53_002214: ABIE53_002214 - choline dehydrogenase, at 2,486,982 to 2,488,658 _002214
Group Condition ABIE53_002210 ABIE53_002211 ABIE53_002212 ABIE53_002213 ABIE53_002214
in planta Plant=no_plant; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.1 -0.4 -0.5 -0.9 -0.3
carbon source Shikimic Acid 5 mM (C) -0.1 -1.4 -0.4 -0.4 +0.3
plant outgrowth control Plant outgrowth control -0.1 -1.5 -0.3 -0.1 +0.1
r2a outgrowth control R2A outgrowth control -0.2 -1.2 -0.5 +0.1 +0.2
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=root; GrowthSubstrate=sterile_soil; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.4 +0.5 -0.9 -0.5 -0.3
in planta Plant=Arabidopsis_thaliana; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.3 -0.1 -1.3 -0.1 -0.4
carbon source L-Tryptophan (C) -0.3 +0.4 -0.1 -0.5 -0.8
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.1 -1.3 -0.5 +0.6 -0.0
carbon source butyrate (C) +0.1 +0.6 -0.6 -0.8 -0.3
stress R2A with Tricalcium phosphate 0.5 g/L -0.0 -1.0 -0.4 +0.1 +0.5
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=clay; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.3 +0.5 -0.3 -0.5 -0.7
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sterile_soil; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.4 +0.8 +0.2 -0.6 -0.3
stress RCH2_defined_glucose_5mM with Sucrose 5 mM +0.1 +0.9 +0.2 -1.0 -0.4
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.3 +0.8 -0.6 +0.5 -0.4
in planta Plant=no_plant; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_liquid; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.2 +0.2 +0.9 -0.5 -0.6
carbon source D-Glucuronic Acid (C) +0.0 +1.2 +0.3 -0.5 -0.3
carbon source D-Glucose-6-Phosphate (C) -0.2 +1.5 -0.1 -0.1 -0.1
in planta Plant=Brachypodium_distachyon; PreTreatment=None; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=R2A_with_kan10; Time=21days -0.5 +1.3 -0.2 +0.4 +0.1
in planta Plant=Brachypodium_distachyon; PreTreatment=None; PlantTreatment=low_phosphate; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=R2A_with_kan10; Time=21days +0.0 +0.8 -0.5 +0.3 +0.5
m9 no stress control M9 no stress control +0.2 +0.7 -0.4 +0.4 +0.4
carbon source D-Sorbitol (C) +0.1 +1.4 -0.2 -0.3 +0.3
carbon source Tween 20 (C) +0.1 +1.2 -0.2 +0.4 -0.1
in planta Plant=no_plant; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_liquid; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.7 +0.6 -0.6 +0.4 +0.4
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=liquid_soil_extract; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.2 +0.3 +0.7 +0.8 -0.4
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=19_days +0.1 +1.4 +0.3 +0.2 -0.4
carbon source D-Sorbitol (C) +0.4 +1.1 -0.2 +0.1 +0.3
in planta Plant=Brachypodium_distachyon; PreTreatment=None; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=R2A_with_kan10; Time=21days -0.5 +0.4 +0.4 +1.0 +0.6
in planta Plant=no_plant; PlantTreatment=None; Sample=soil; GrowthSubstrate=liquid_soil_extract; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.2 +0.1 -0.1 +1.1 +0.8
carbon source L-Histidine (C) -0.0 +1.4 -0.5 +0.6 +0.4
in planta Plant=no_plant; PlantTreatment=None; Sample=soil; GrowthSubstrate=liquid_soil_extract; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.4 +0.5 +0.2 +0.8 +0.2
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