Fitness for 5 genes in Paraburkholderia graminis OAS925

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500 ntABIE53_002112 and ABIE53_002113 are separated by 105 nucleotidesABIE53_002113 and ABIE53_002114 overlap by 2 nucleotidesABIE53_002114 and ABIE53_002115 are separated by 171 nucleotidesABIE53_002115 and ABIE53_002116 are separated by 180 nucleotides ABIE53_002112: ABIE53_002112 - glycerate kinase, at 2,367,096 to 2,368,241 _002112 ABIE53_002113: ABIE53_002113 - hypothetical protein, at 2,368,347 to 2,368,643 _002113 ABIE53_002114: ABIE53_002114 - trigger factor, at 2,368,642 to 2,369,988 _002114 ABIE53_002115: ABIE53_002115 - ATP-dependent Clp protease protease subunit, at 2,370,160 to 2,370,813 _002115 ABIE53_002116: ABIE53_002116 - ATP-dependent Clp protease ATP-binding subunit ClpX, at 2,370,994 to 2,372,265 _002116
Group Condition ABIE53_002112 ABIE53_002113 ABIE53_002114 ABIE53_002115 ABIE53_002116
in planta Plant=no_plant; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -5.8 -0.9 -2.9 -2.4 -3.2
in planta Plant=no_plant; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -3.5 -0.6 -2.2 -3.3 -3.0
in planta Plant=no_plant; PlantTreatment=None; Sample=soil; GrowthSubstrate=liquid_soil_extract; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -1.1 -1.3 -2.8 -3.1 -2.7
stress RCH2_defined_glucose_5mM with caffeic 0.5 mM -0.5 -1.0 -2.0 -3.1 -3.5
stress RCH2_defined_glucose_5mM with Indole-3-pyruvic 1 mM -0.5 -1.1 -2.0 -3.4 -3.0
stress RCH2_defined_glucose_5mM with Salicylic 5 mM -0.4 -1.2 -2.6 -2.1 -3.6
stress RCH2_defined_glucose_5mM with Indole-3-pyruvic 1 mM +0.3 -1.0 -2.0 -3.7 -3.5
stress RCH2_defined_glucose_5mM with Pyridoxal 1 mM -0.3 -1.4 -2.4 -2.8 -3.0
stress RCH2_defined_glucose_5mM with Pyridoxal 1 mM -0.1 -0.5 -3.5 -2.6 -2.8
stress RCH2_defined_glucose_5mM with caffeic 1 mM +0.4 -0.5 -2.4 -2.8 -3.6
stress RCH2_defined_glucose_5mM with caffeic 0.5 mM -0.1 -0.6 -1.8 -2.8 -3.7
stress RCH2_defined_glucose_5mM with Cinnamic 5 mM -0.4 -1.3 -2.1 -1.4 -3.6
stress RCH2_defined_glucose_5mM with Indole-3-pyruvic 0.5 mM -0.3 -0.9 -1.0 -2.8 -3.8
carbon source Inosine (C) -5.1 +0.1 +0.1 -0.3 -3.6
in planta Plant=no_plant; PlantTreatment=None; Sample=soil; GrowthSubstrate=liquid_soil_extract; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.1 -0.6 -1.6 -3.1 -3.2
stress RCH2_defined_glucose_5mM with Cinnamic 5 mM -0.4 -0.9 -2.4 -1.5 -3.4
in planta Plant=no_plant; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -1.7 -0.4 -1.5 -1.7 -2.7
stress RCH2_defined_glucose_5mM with Indole-3-pyruvic 0.5 mM -0.5 -0.1 -1.3 -2.4 -3.6
stress RCH2_defined_glucose_5mM with Lumazine 5 mM -0.0 -0.4 -2.4 -1.6 -3.4
stress RCH2_defined_glucose_5mM with 2,3-dihydroxybenzoic 5 mM -0.2 -0.8 -1.2 -2.2 -3.4
stress RCH2_defined_glucose_5mM with Pyridoxal 0.5 mM -0.0 -1.0 -1.8 -1.4 -3.6
stress RCH2_defined_glucose_5mM with Adenine 5 mM -3.5 -0.2 -1.5 -0.2 -2.2
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=19_days -1.5 -0.5 -1.8 -2.3 -1.4
stress RCH2_defined_glucose_5mM with caffeic 1 mM +0.1 -0.3 -1.8 -2.5 -3.1
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -1.2 -0.5 -1.7 -1.3 -2.9
stress RCH2_defined_glucose_5mM with Serotonin 5 mM +0.2 -1.1 -2.1 -1.8 -2.8
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=liquid_soil_extract; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.0 -1.1 -1.7 -1.9 -2.7
stress RCH2_defined_glucose_5mM with Adenine 4 mM -3.3 -0.5 -1.0 -0.3 -2.4
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sterile_soil; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.4 -0.4 -3.3 -1.3 -2.0
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=root; GrowthSubstrate=liquid_soil_extract; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=19_days +0.2 -0.7 -0.9 -2.3 -3.1
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