Fitness for 5 genes in Paraburkholderia graminis OAS925

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 488 experiments or choose conditions or try the comparative fitness browser

500 ntABIE53_002105 and ABIE53_002106 are separated by 34 nucleotidesABIE53_002106 and ABIE53_002107 are separated by 347 nucleotidesABIE53_002107 and ABIE53_002108 are separated by 518 nucleotidesABIE53_002108 and ABIE53_002109 are separated by 3 nucleotides ABIE53_002105: ABIE53_002105 - hypothetical protein, at 2,359,735 to 2,359,974 _002105 ABIE53_002106: ABIE53_002106 - hypothetical protein, at 2,360,009 to 2,360,236 _002106 ABIE53_002107: ABIE53_002107 - hypothetical protein, at 2,360,584 to 2,360,871 _002107 ABIE53_002108: ABIE53_002108 - putative membrane protein, at 2,361,390 to 2,364,905 _002108 ABIE53_002109: ABIE53_002109 - hypothetical protein, at 2,364,909 to 2,366,060 _002109
Group Condition ABIE53_002105 ABIE53_002106 ABIE53_002107 ABIE53_002108 ABIE53_002109
in planta Plant=no_plant; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -2.3 -1.7 N.D. +0.3 -0.1
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_liquid; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.8 -1.5 N.D. +0.2 -0.3
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=clay; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -1.2 -1.0 N.D. +0.2 -0.3
stress R2A with Tricalcium phosphate 0.5 g/L -2.5 +0.2 N.D. +0.1 +0.0
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_liquid; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -1.7 -1.0 N.D. +0.3 +0.3
in planta Plant=no_plant; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_liquid; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.8 -0.6 N.D. -0.1 -0.4
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.3 -1.5 N.D. -0.1 +0.0
in planta Plant=no_plant; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -1.8 +0.4 N.D. -0.0 -0.3
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_liquid; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -1.4 -0.6 N.D. +0.0 +0.3
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=clay; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -1.6 -0.4 N.D. +0.2 +0.2
carbon source D-Mannose (C) -2.2 +0.2 N.D. +0.1 +0.3
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=liquid_soil_extract; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -1.3 -0.3 N.D. +0.0 +0.2
carbon source Cinnamic and Ethanols -0.8 -0.8 N.D. +0.0 +0.2
stress M9 with Chloride 200 mM -1.1 -0.4 N.D. +0.0 +0.1
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_liquid; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.4 -1.1 N.D. +0.1 +0.2
motility_chemotaxis Motility_chemotaxis, R2A; inner cut -1.4 +0.3 N.D. +0.1 +0.1
in planta Plant=no_plant; PlantTreatment=None; Sample=soil; GrowthSubstrate=liquid_soil_extract; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -1.3 +0.3 N.D. +0.1 -0.1
in planta Plant=no_plant; PlantTreatment=None; Sample=soil; GrowthSubstrate=clay; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.0 -1.5 N.D. +0.0 +0.6
plant outgrowth control Plant outgrowth control -1.0 -0.3 N.D. +0.1 +0.4
carbon source Laminarin 10 g/L (C) -1.3 +0.1 N.D. +0.2 +0.2
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=liquid_soil_extract; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -1.0 +0.6 N.D. -0.1 +0.1
stress RCH2_defined_glucose_5mM with Abietic Acid 5 mM -0.8 +0.4 N.D. -0.2 +0.3
nitrogen source histamine 2mM N source -0.8 +0.7 N.D. +0.1 +0.0
stress RCH2_defined_glucose_5mM with caffeic 1 mM +0.7 -0.5 N.D. -0.1 +0.3
carbon source butyrate (C) -0.6 +0.7 N.D. +0.1 +0.2
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=19_days +1.0 -0.6 N.D. +0.2 +0.3
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=19_days +1.4 -0.9 N.D. +0.3 +0.3
stress RCH2_defined_glucose_5mM with Ferulic Acid 5 mM +1.2 +0.3 N.D. -0.2 -0.1
stress M9 with 3-methyl-2-butenol 2 g/L +0.8 +0.9 N.D. +0.1 -0.0
in planta Plant=switchgrass; PreTreatment=None; PlantTreatment=low_phosphate; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=R2A_with_kan10; Time=21days +1.3 +0.8 N.D. +0.0 +0.2
remove
ABIE53_002105
plot		 remove
ABIE53_002106
plot		 remove
ABIE53_002107		 remove
ABIE53_002108
plot		 remove
ABIE53_002109
plot