Fitness for 5 genes in Paraburkholderia graminis OAS925

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500 ntABIE53_002050 and ABIE53_002051 are separated by 88 nucleotidesABIE53_002051 and ABIE53_002052 are separated by 78 nucleotidesABIE53_002052 and ABIE53_002053 are separated by 94 nucleotidesABIE53_002053 and ABIE53_002054 are separated by 252 nucleotides ABIE53_002050: ABIE53_002050 - NitT/TauT family transport system substrate-binding protein, at 2,299,109 to 2,300,146 _002050 ABIE53_002051: ABIE53_002051 - NitT/TauT family transport system ATP-binding protein, at 2,300,235 to 2,301,047 _002051 ABIE53_002052: ABIE53_002052 - NitT/TauT family transport system permease protein, at 2,301,126 to 2,301,950 _002052 ABIE53_002053: ABIE53_002053 - NADPH2:quinone reductase, at 2,302,045 to 2,303,019 _002053 ABIE53_002054: ABIE53_002054 - 5'-nucleotidase, at 2,303,272 to 2,304,030 _002054
Group Condition ABIE53_002050 ABIE53_002051 ABIE53_002052 ABIE53_002053 ABIE53_002054
motility_chemotaxis Motility_chemotaxis, R2A; outer cut +0.1 -0.2 -0.2 -0.5 -2.5
in planta Plant=switchgrass; PreTreatment=None; PlantTreatment=low_phosphate; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=R2A_with_kan10; Time=21days +0.1 -0.3 -0.2 -0.1 -1.8
motility_chemotaxis Motility_chemotaxis, R2A; outer cut +0.1 +0.2 -0.1 -0.4 -2.0
stress RCH2_defined_glucose_5mM with Serotonin 5 mM -0.4 -0.3 +0.1 -0.1 -1.3
in planta Plant=no_plant; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.8 -0.2 +0.3 -0.1 -0.9
stress R2A with Ethanol 2.5 vol% -0.2 +0.2 +0.0 +0.0 -1.5
in planta Plant=Brachypodium_distachyon; PreTreatment=None; PlantTreatment=low_phosphate; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=R2A_with_kan10; Time=21days -0.2 +0.2 -0.0 -0.1 -1.3
in planta Plant=switchgrass; PreTreatment=None; PlantTreatment=low_phosphate; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=R2A_with_kan10; Time=21days -0.4 -0.5 -0.3 +0.5 -0.7
stress R2A with Isopropyl alcohol 21 g/L +0.1 +0.0 -0.1 +0.2 -1.4
stress RCH2_defined_glucose_5mM with Indole-3-pyruvic 1 mM +0.2 -0.5 +0.1 +0.0 -1.1
in planta Plant=Brachypodium_distachyon; PreTreatment=None; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=R2A_with_kan10; Time=21days +0.4 -0.5 -0.1 +0.2 -1.0
in planta Plant=switchgrass; PreTreatment=None; PlantTreatment=low_phosphate; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=R2A_with_kan10; Time=21days +0.2 +0.1 -0.2 +0.7 -1.5
in planta Plant=no_plant; PlantTreatment=None; Sample=soil; GrowthSubstrate=liquid_soil_extract; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.1 +0.5 -0.0 +0.4 -0.9
plant outgrowth control Plant outgrowth control -0.5 +0.5 -0.2 -0.3 +0.5
carbon source L-Proline (C) -0.2 -0.7 +0.0 +0.4 +0.6
carbon source Xylitol (C) -0.2 -0.6 +0.1 +0.3 +0.7
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_liquid; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.4 +1.5 -0.3 -0.0 -0.3
carbon source L-Histidine (C) -0.3 -0.7 +0.2 +0.3 +0.9
carbon source D-Sorbitol (C) -0.2 -0.6 +0.1 +0.4 +0.9
carbon source Acetylated xylan 10 g/L (C) -0.4 +0.5 -0.4 +0.2 +0.6
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_liquid; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.1 +0.8 -0.5 -0.6 +1.0
carbon source D-Fructose (C) -0.2 -0.1 +0.3 -0.2 +1.3
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sterile_soil; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.2 +0.6 -0.2 +0.1 +0.8
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_liquid; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.1 +1.0 -0.1 +0.0 +0.6
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_liquid; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.2 +1.2 -0.2 -0.0 +0.3
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_liquid; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.2 +1.0 -0.1 -0.2 +1.1
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=root; GrowthSubstrate=sterile_soil; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.0 +0.5 -0.0 +0.4 +1.1
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_liquid; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.2 +1.5 -0.1 -0.1 +0.9
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_liquid; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.1 +1.0 +0.1 +0.1 +1.1
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.2 +0.4 -0.1 +1.0 +1.4
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