Fitness for 5 genes in Paraburkholderia graminis OAS925

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500 ntABIE53_001937 and ABIE53_001938 are separated by 289 nucleotidesABIE53_001938 and ABIE53_001939 are separated by 210 nucleotidesABIE53_001939 and ABIE53_003823 are separated by 144 nucleotidesABIE53_003823 and ABIE53_003824 are separated by 152 nucleotides ABIE53_001937: ABIE53_001937 - aryl-alcohol dehydrogenase-like predicted oxidoreductase, at 2,189,286 to 2,190,305 _001937 ABIE53_001938: ABIE53_001938 - hypothetical protein, at 2,190,595 to 2,191,074 _001938 ABIE53_001939: ABIE53_001939 - hypothetical protein, at 2,191,285 to 2,191,677 _001939 ABIE53_003823: ABIE53_003823 - tRNA-Leu, at 2,191,822 to 2,191,908 _003823 ABIE53_003824: ABIE53_003824 - tRNA-Leu, at 2,192,061 to 2,192,147 _003824
Group Condition ABIE53_001937 ABIE53_001938 ABIE53_001939 ABIE53_003823 ABIE53_003824
motility_chemotaxis Motility_chemotaxis, R2A; outer cut +0.1 -0.5 +0.4 -3.8 N.D.
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=19_days +0.4 -0.4 -0.1 -2.7 N.D.
in planta Plant=no_plant; PlantTreatment=None; Sample=soil; GrowthSubstrate=liquid_soil_extract; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.2 +0.4 -0.4 -2.3 N.D.
r2a outgrowth control R2A outgrowth control -0.3 +1.0 -0.1 -3.1 N.D.
in planta Plant=no_plant; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.9 +0.9 -0.1 -1.1 N.D.
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=19_days -0.9 +0.5 -0.7 +0.8 N.D.
carbon source Acetylated xylan 10 g/L (C) +0.1 -0.5 -1.1 +1.4 N.D.
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=19_days +0.2 +1.6 -0.4 -1.3 N.D.
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.9 +0.3 -0.5 +1.6 N.D.
plant outgrowth control Plant outgrowth control +0.1 -1.1 -0.4 +2.1 N.D.
carbon source m-Inositol (C) +0.1 -0.8 +0.3 +1.8 N.D.
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=root; GrowthSubstrate=sterile_soil; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.2 +0.8 -0.5 +1.3 N.D.
carbon source D-Mannose (C) -0.2 -1.4 +0.6 +2.4 N.D.
carbon source D-Galactose (C) -0.6 -0.6 +0.4 +2.4 N.D.
carbon source D-Gluconic Acid (C) -0.0 -0.6 +0.1 +2.3 N.D.
carbon source D-Glucuronic Acid (C) -0.4 +0.2 +0.2 +2.0 N.D.
carbon source D,L-Malic Acid (C) -0.4 +0.7 +0.0 +2.0 N.D.
r2a outgrowth control R2A outgrowth control -0.1 +0.1 -0.6 +2.8 N.D.
carbon source D-Sorbitol (C) -0.2 -0.2 +0.3 +2.4 N.D.
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_liquid; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.2 +0.8 +0.1 +2.0 N.D.
carbon source L-Histidine (C) +0.2 -0.4 +0.4 +2.6 N.D.
carbon source D-Glucose (C) +0.2 -0.3 +0.5 +2.5 N.D.
carbon source D-Galacturonic Acid (C) +0.2 +0.3 +0.3 +2.2 N.D.
carbon source D-Fructose (C) -0.2 -0.8 +0.8 +3.4 N.D.
plant outgrowth control Plant outgrowth control +0.0 -0.2 -0.4 +3.8 N.D.
phage Burk1_100 +0.4 +0.8 +0.4 +1.6 N.D.
carbon source D-Sorbitol (C) +0.4 +0.1 +0.3 +2.6 N.D.
carbon source D-Glucose-6-Phosphate (C) +0.1 +0.2 +0.3 +2.9 N.D.
carbon source Tween 20 (C) +0.3 +0.3 +0.3 +2.7 N.D.
plant outgrowth control Plant outgrowth control +0.0 -0.4 +0.0 +4.4 N.D.
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