Fitness for 5 genes in Paraburkholderia graminis OAS925

Top 30 experiments (either direction), sorted by average fitness

Or view all 488 experiments or choose conditions or try the comparative fitness browser

Group	Condition	ABIE53_001867	ABIE53_001868	ABIE53_001869	ABIE53_001870	ABIE53_001871
in planta	Plant=Brachypodium_distachyon; PreTreatment=None; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=R2A_with_kan10; Time=21days	-0.1	-1.4	-1.9	+0.2	-1.2
in planta	Plant=no_plant; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days	+0.4	-3.1	-0.8	-0.2	-0.6
carbon source	Beta-Lactose (C)	-0.5	-0.4	-3.0	+0.1	-0.4
carbon source	m-Inositol (C)	+0.0	-0.8	-2.8	-0.0	-0.5
in planta	Plant=Medicago_truncatula; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sterile_soil; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=19_days	-0.7	-1.8	-0.8	-0.0	-0.5
stress	M9 with 3-methyl-3-butenol 4.5 g/L	+0.1	+0.0	-4.1	+0.2	-0.1
in planta	Plant=Brachypodium_distachyon; PreTreatment=None; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=R2A_with_kan10; Time=21days	-0.9	-1.2	-1.7	+0.2	-0.2
in planta	Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days	-0.3	-0.7	-2.6	+0.5	-0.5
in planta	Plant=no_plant; PlantTreatment=None; Sample=soil; GrowthSubstrate=liquid_soil_extract; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days	+0.1	-0.8	-2.4	+0.2	-0.4
soil extract	Sucrose 5 mM in soil extract	+0.3	-1.0	-3.2	-0.0	+0.6
nitrogen source	histamine 2mM N source	-0.5	-1.4	-1.4	-0.0	+0.2
plant outgrowth control	Plant outgrowth control	-0.3	+0.4	-1.3	-0.1	-1.2
soil extract	Chlorogenic 5 mM in soil extract	-0.3	+0.3	-2.4	+0.1	-0.2
carbon source	Tween 20 (C)	+0.6	-0.5	-2.3	+0.2	-0.5
carbon source	Adenosine (C)	-0.1	-1.2	-1.6	+0.5	+0.1
soil extract	Serotonin 5 mM in soil extract	+0.4	-1.6	-1.4	+0.0	+0.3
carbon source	L-Serine (C)	+0.1	+0.4	-2.4	-0.2	-0.2
carbon source	Acetylated xylan 10 g/L (C)	+0.3	-2.5	-0.8	+0.5	+0.3
in planta	Plant=no_plant; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_liquid; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days	-0.1	+0.6	-2.8	+0.2	+0.4
carbon source	Tween 20 (C)	+0.5	+0.3	-2.4	+0.4	-0.4
stress	RCH2_defined_glucose_5mM with Sucrose 5 mM	+0.1	+0.9	-2.4	-0.5	+0.3
stress	RCH2_defined_glucose_5mM with 4-Hydroxybenzoic Acid 5 mM	-0.2	+0.8	-2.7	+0.0	+0.5
r2a outgrowth control	R2A outgrowth control	-0.2	+0.9	-1.9	-0.0	-0.2
in planta	Plant=switchgrass; PreTreatment=None; PlantTreatment=low_phosphate; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=R2A_with_kan10; Time=21days	-0.1	+0.6	-2.3	+0.6	+0.9
in planta	Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_liquid; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days	-0.6	+1.1	-1.0	+0.1	+0.4
in planta	Plant=no_plant; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days	-0.1	-1.3	+2.0	-0.4	-0.1
in planta	Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=19_days	+0.0	+0.3	+2.2	+0.1	-1.4
in planta	Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days	+0.7	-0.3	+1.2	+0.4	+0.7
in planta	Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=19_days	-0.4	+1.1	+2.4	+0.1	+0.1
in planta	Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=liquid_soil_extract; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days	+0.3	+0.2	+1.9	+0.2	+0.9